Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SLC25A6P2-201ENST00000497974 877 ntBASIC18.08■□□□□ 0.48
O00370 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 RNA5SP415-201ENST00000517246 115 ntBASIC18.08■□□□□ 0.48
O00370 UNC93B6-202ENST00000528242 690 ntBASIC18.08■□□□□ 0.48
O00370 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.08■□□□□ 0.48
O00370 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.08■□□□□ 0.48
O00370 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.08■□□□□ 0.48
O00370 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
O00370 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.08■□□□□ 0.48
O00370 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.08■□□□□ 0.48
O00370 GGTLC5P-201ENST00000617623 998 ntBASIC18.08■□□□□ 0.48
O00370 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.08■□□□□ 0.48
O00370 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.08■□□□□ 0.48
O00370 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
O00370 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.07■□□□□ 0.48
O00370 AC002310.6-201ENST00000624451 1377 ntBASIC18.07■□□□□ 0.48
O00370 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.07■□□□□ 0.48
O00370 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
O00370 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.07■□□□□ 0.48
O00370 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.07■□□□□ 0.48
O00370 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.07■□□□□ 0.48
O00370 AC009947.1-201ENST00000444350 727 ntBASIC18.07■□□□□ 0.48
O00370 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.07■□□□□ 0.48
O00370 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.07■□□□□ 0.48
O00370 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.07■□□□□ 0.48
O00370 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.07■□□□□ 0.48
O00370 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.07■□□□□ 0.48
O00370 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
O00370 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.07■□□□□ 0.48
O00370 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.07■□□□□ 0.48
O00370 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
O00370 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
O00370 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
O00370 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
O00370 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
O00370 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
O00370 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
O00370 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
O00370 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
O00370 IL9RP2-201ENST00000423948 1312 ntBASIC18.06■□□□□ 0.48
O00370 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
O00370 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
O00370 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.06■□□□□ 0.48
O00370 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
O00370 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
O00370 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
O00370 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.06■□□□□ 0.48
O00370 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.06■□□□□ 0.48
O00370 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.06■□□□□ 0.48
O00370 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
O00370 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
O00370 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.06■□□□□ 0.48
O00370 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
O00370 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
O00370 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
O00370 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
O00370 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.05■□□□□ 0.48
O00370 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.05■□□□□ 0.48
O00370 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.05■□□□□ 0.48
O00370 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.05■□□□□ 0.48
O00370 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.05■□□□□ 0.48
O00370 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.05■□□□□ 0.48
O00370 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
O00370 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
O00370 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.05■□□□□ 0.48
O00370 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.05■□□□□ 0.48
O00370 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms