Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SLC28A1O00337 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SLC28A1O00337 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A1O00337 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SLC28A1O00337 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC28A1O00337 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC28A1O00337 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC28A1O00337 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SLC28A1O00337 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A1O00337 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 CYP2T1P-202ENST00000641596 2535 ntBASIC16.34■□□□□ 0.21
SLC28A1O00337 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.34■□□□□ 0.21
SLC28A1O00337 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC28A1O00337 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
SLC28A1O00337 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC28A1O00337 TERC-201ENST00000602385 541 ntBASIC16.34■□□□□ 0.21
SLC28A1O00337 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A1O00337 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SLC28A1O00337 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 AC243591.1-201ENST00000452967 1364 ntBASIC16.34■□□□□ 0.21
SLC28A1O00337 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A1O00337 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC28A1O00337 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC28A1O00337 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC28A1O00337 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC28A1O00337 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC28A1O00337 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A1O00337 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A1O00337 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A1O00337 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.21
SLC28A1O00337 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A1O00337 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC28A1O00337 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC28A1O00337 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A1O00337 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC28A1O00337 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A1O00337 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC28A1O00337 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC28A1O00337 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC28A1O00337 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SLC28A1O00337 AC132008.2-207ENST00000454517 770 ntBASIC16.33■□□□□ 0.2
SLC28A1O00337 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SLC28A1O00337 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.33■□□□□ 0.2
SLC28A1O00337 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SLC28A1O00337 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.33■□□□□ 0.2
SLC28A1O00337 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC28A1O00337 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A1O00337 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLC28A1O00337 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A1O00337 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC28A1O00337 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A1O00337 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A1O00337 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A1O00337 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SLC28A1O00337 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC28A1O00337 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A1O00337 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC28A1O00337 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC28A1O00337 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC28A1O00337 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A1O00337 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms