Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3B1O00203 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
AP3B1O00203 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
AP3B1O00203 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
AP3B1O00203 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
AP3B1O00203 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.14■□□□□ 0.33
AP3B1O00203 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.14■□□□□ 0.33
AP3B1O00203 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.14■□□□□ 0.33
AP3B1O00203 FGFR3P6-201ENST00000457012 610 ntBASIC17.14■□□□□ 0.33
AP3B1O00203 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.14■□□□□ 0.33
AP3B1O00203 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.14■□□□□ 0.33
AP3B1O00203 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.14■□□□□ 0.33
AP3B1O00203 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 MTDHP4-201ENST00000600287 670 ntBASIC17.14■□□□□ 0.33
AP3B1O00203 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
AP3B1O00203 REXO1L6P-202ENST00000619970 1078 ntBASIC17.14■□□□□ 0.33
AP3B1O00203 AC004706.3-202ENST00000621574 984 ntBASIC17.14■□□□□ 0.33
AP3B1O00203 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AP3B1O00203 AC006538.1-201ENST00000567905 1585 ntBASIC17.14■□□□□ 0.33
AP3B1O00203 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3B1O00203 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
AP3B1O00203 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3B1O00203 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.14■□□□□ 0.33
AP3B1O00203 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3B1O00203 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3B1O00203 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3B1O00203 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3B1O00203 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3B1O00203 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.13■□□□□ 0.33
AP3B1O00203 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3B1O00203 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3B1O00203 PAWRP1-201ENST00000451083 565 ntBASIC17.13■□□□□ 0.33
AP3B1O00203 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
AP3B1O00203 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.13■□□□□ 0.33
AP3B1O00203 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.13■□□□□ 0.33
AP3B1O00203 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3B1O00203 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3B1O00203 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.13■□□□□ 0.33
AP3B1O00203 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3B1O00203 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3B1O00203 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 HLA-A-202ENST00000376806 1854 ntBASIC17.13■□□□□ 0.33
AP3B1O00203 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3B1O00203 AC006277.1-201ENST00000624348 1610 ntBASIC17.13■□□□□ 0.33
AP3B1O00203 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AP3B1O00203 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3B1O00203 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3B1O00203 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3B1O00203 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms