Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 AC138649.4-201ENST00000612222 287 ntBASIC19.58■□□□□ 0.72
USP17L11C9JVI0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 AJ011932.1-201ENST00000621707 465 ntBASIC19.58■□□□□ 0.72
USP17L11C9JVI0 AC084121.4-201ENST00000641598 221 ntBASIC19.58■□□□□ 0.72
USP17L11C9JVI0 AF228730.8-201ENST00000642140 221 ntBASIC19.58■□□□□ 0.72
USP17L11C9JVI0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP17L11C9JVI0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 TOP3BP1-201ENST00000420768 1380 ntBASIC19.57■□□□□ 0.72
USP17L11C9JVI0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.57■□□□□ 0.72
USP17L11C9JVI0 AC091167.2-201ENST00000579581 588 ntBASIC19.57■□□□□ 0.72
USP17L11C9JVI0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.57■□□□□ 0.72
USP17L11C9JVI0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 WASH6P-202ENST00000359512 1437 ntBASIC19.57■□□□□ 0.72
USP17L11C9JVI0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP17L11C9JVI0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 PMS2P4-201ENST00000412466 1052 ntBASIC19.56■□□□□ 0.72
USP17L11C9JVI0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 KLF2P3-201ENST00000451977 1087 ntBASIC19.56■□□□□ 0.72
USP17L11C9JVI0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 AC138761.1-201ENST00000584393 385 ntBASIC19.56■□□□□ 0.72
USP17L11C9JVI0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP17L11C9JVI0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 RNU1-129P-201ENST00000384064 167 ntBASIC19.55■□□□□ 0.72
USP17L11C9JVI0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 MIR943-201ENST00000401286 94 ntBASIC19.55■□□□□ 0.72
USP17L11C9JVI0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 INGX-202ENST00000489074 768 ntBASIC19.55■□□□□ 0.72
USP17L11C9JVI0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms