Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
HFM1A2PYH4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
HFM1A2PYH4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HFM1A2PYH4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HFM1A2PYH4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
HFM1A2PYH4 HLA-A-202ENST00000376806 1854 ntBASIC24.82■■□□□ 1.56
HFM1A2PYH4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
HFM1A2PYH4 AC006538.1-201ENST00000567905 1585 ntBASIC24.82■■□□□ 1.56
HFM1A2PYH4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 SPDYE14P-201ENST00000442619 822 ntBASIC24.82■■□□□ 1.56
HFM1A2PYH4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 RNF216P1-203ENST00000404404 2427 ntBASIC24.82■■□□□ 1.56
HFM1A2PYH4 AC080080.1-201ENST00000625121 2420 ntBASIC24.82■■□□□ 1.56
HFM1A2PYH4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HFM1A2PYH4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC24.82■■□□□ 1.56
HFM1A2PYH4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 AL138918.1-201ENST00000568306 659 ntBASIC24.81■■□□□ 1.56
HFM1A2PYH4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
HFM1A2PYH4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HFM1A2PYH4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 CD81-202ENST00000381036 880 ntTSL 3 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 PON3-203ENST00000427422 894 ntTSL 3 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 AC105233.2-201ENST00000523697 349 ntBASIC24.8■■□□□ 1.56
HFM1A2PYH4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 AF228730.5-201ENST00000530288 346 ntBASIC24.8■■□□□ 1.56
HFM1A2PYH4 MIR3197-201ENST00000582241 73 ntBASIC24.8■■□□□ 1.56
HFM1A2PYH4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC24.8■■□□□ 1.56
HFM1A2PYH4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HFM1A2PYH4 GPAA1P2-202ENST00000606848 1787 ntBASIC24.8■■□□□ 1.56
HFM1A2PYH4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HFM1A2PYH4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 AC027307.2-201ENST00000591252 911 ntBASIC24.79■■□□□ 1.56
HFM1A2PYH4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
HFM1A2PYH4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
HFM1A2PYH4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
HFM1A2PYH4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HFM1A2PYH4 AC073439.1-201ENST00000624121 1774 ntBASIC24.79■■□□□ 1.56
HFM1A2PYH4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC24.79■■□□□ 1.56
HFM1A2PYH4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HFM1A2PYH4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HFM1A2PYH4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HFM1A2PYH4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms