Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF103-CHMP3A0A140T963 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC122714.2-201ENST00000502787 707 ntBASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 KRT18P21-201ENST00000515767 1272 ntBASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AL121956.5-201ENST00000625261 221 ntBASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC092171.3-201ENST00000610122 2651 ntBASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF103-CHMP3A0A140T963 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms