Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC004790.1-201ENST00000612686 536 ntBASIC21.32■■□□□ 1
LOC102724428A0A0B4J2F2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.32■■□□□ 1
LOC102724428A0A0B4J2F2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.32■■□□□ 1
LOC102724428A0A0B4J2F2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
LOC102724428A0A0B4J2F2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.32■■□□□ 1
LOC102724428A0A0B4J2F2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.32■■□□□ 1
LOC102724428A0A0B4J2F2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LOC102724428A0A0B4J2F2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.32■■□□□ 1
LOC102724428A0A0B4J2F2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 DFFBP1-201ENST00000433250 979 ntBASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 AC098859.1-201ENST00000502915 1238 ntBASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 BTBD7P1-201ENST00000447253 1453 ntBASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 GOLGA2P9-201ENST00000596977 1937 ntBASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LOC102724428A0A0B4J2F2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.3■■□□□ 1
LOC102724428A0A0B4J2F2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 AC022494.1-201ENST00000466044 728 ntBASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LOC102724428A0A0B4J2F2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 AC079776.1-201ENST00000401540 1152 ntBASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 AC132938.2-201ENST00000579188 680 ntBASIC21.28■■□□□ 1
LOC102724428A0A0B4J2F2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms