Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCDC187A0A096LP49 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 CD81-202ENST00000381036 880 ntTSL 3 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 AC027307.3-201ENST00000594262 1100 ntBASIC16■□□□□ 0.15
CCDC187A0A096LP49 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 AC020916.1-201ENST00000587762 1774 ntBASIC16■□□□□ 0.15
CCDC187A0A096LP49 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16■□□□□ 0.15
CCDC187A0A096LP49 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC187A0A096LP49 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 SLC22A20-204ENST00000530038 1673 ntBASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 AC016027.1-202ENST00000607927 1699 ntBASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 AC092580.3-201ENST00000430932 139 ntBASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 GAPDHP21-201ENST00000450301 1010 ntBASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 MIR4453-201ENST00000584019 89 ntBASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 AL358472.5-202ENST00000641448 1267 ntBASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 EGFEM1P-202ENST00000431685 1563 ntBASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 AC018470.1-201ENST00000624790 3129 ntBASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 AC133963.1-201ENST00000504166 1679 ntBASIC15.99■□□□□ 0.15
CCDC187A0A096LP49 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 GK-202ENST00000378941 458 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 AC073592.8-201ENST00000624126 511 ntBASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC187A0A096LP49 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms