Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ARFGEF1Q9Y6D6 MIR3621-201ENST00000580529 85 ntBASIC30.05■■■□□ 2.4
ARFGEF1Q9Y6D6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.04■■■□□ 2.4
ARFGEF1Q9Y6D6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.04■■■□□ 2.4
ARFGEF1Q9Y6D6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
ARFGEF1Q9Y6D6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.04■■■□□ 2.4
ARFGEF1Q9Y6D6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ARFGEF1Q9Y6D6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ARFGEF1Q9Y6D6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
ARFGEF1Q9Y6D6 MIR6724-1-201ENST00000616420 92 ntBASIC30.03■■■□□ 2.4
ARFGEF1Q9Y6D6 MIR6724-2-201ENST00000616483 92 ntBASIC30.03■■■□□ 2.4
ARFGEF1Q9Y6D6 MIR6724-4-201ENST00000617390 92 ntBASIC30.03■■■□□ 2.4
ARFGEF1Q9Y6D6 MIR6724-3-201ENST00000622482 92 ntBASIC30.03■■■□□ 2.4
ARFGEF1Q9Y6D6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ARFGEF1Q9Y6D6 AC133561.4-201ENST00000566112 224 ntBASIC30.02■■■□□ 2.4
ARFGEF1Q9Y6D6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
ARFGEF1Q9Y6D6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ARFGEF1Q9Y6D6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ARFGEF1Q9Y6D6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
ARFGEF1Q9Y6D6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.01■■■□□ 2.4
ARFGEF1Q9Y6D6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.4
ARFGEF1Q9Y6D6 AC005837.3-201ENST00000612163 286 ntBASIC30.01■■■□□ 2.39
ARFGEF1Q9Y6D6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.01■■■□□ 2.39
ARFGEF1Q9Y6D6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ARFGEF1Q9Y6D6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30■■■□□ 2.39
ARFGEF1Q9Y6D6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ARFGEF1Q9Y6D6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
ARFGEF1Q9Y6D6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARFGEF1Q9Y6D6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARFGEF1Q9Y6D6 AC104564.3-201ENST00000582367 638 ntBASIC29.99■■■□□ 2.39
ARFGEF1Q9Y6D6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARFGEF1Q9Y6D6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ARFGEF1Q9Y6D6 ABCB10P3-201ENST00000561950 2166 ntBASIC29.98■■■□□ 2.39
ARFGEF1Q9Y6D6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ARFGEF1Q9Y6D6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ARFGEF1Q9Y6D6 KRT18P10-201ENST00000388836 1287 ntBASIC29.98■■■□□ 2.39
ARFGEF1Q9Y6D6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
ARFGEF1Q9Y6D6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ARFGEF1Q9Y6D6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
ARFGEF1Q9Y6D6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.97■■■□□ 2.39
ARFGEF1Q9Y6D6 AC120024.1-201ENST00000562672 995 ntBASIC29.97■■■□□ 2.39
ARFGEF1Q9Y6D6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
ARFGEF1Q9Y6D6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.97■■■□□ 2.39
ARFGEF1Q9Y6D6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
ARFGEF1Q9Y6D6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
ARFGEF1Q9Y6D6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ARFGEF1Q9Y6D6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ARFGEF1Q9Y6D6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
ARFGEF1Q9Y6D6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
ARFGEF1Q9Y6D6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ARFGEF1Q9Y6D6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
ARFGEF1Q9Y6D6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.95■■■□□ 2.38
ARFGEF1Q9Y6D6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.94■■■□□ 2.38
ARFGEF1Q9Y6D6 AC092666.2-201ENST00000613287 246 ntBASIC29.94■■■□□ 2.38
ARFGEF1Q9Y6D6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.94■■■□□ 2.38
ARFGEF1Q9Y6D6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
ARFGEF1Q9Y6D6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
ARFGEF1Q9Y6D6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
ARFGEF1Q9Y6D6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
ARFGEF1Q9Y6D6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
ARFGEF1Q9Y6D6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
ARFGEF1Q9Y6D6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ARFGEF1Q9Y6D6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.93■■■□□ 2.38
ARFGEF1Q9Y6D6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.93■■■□□ 2.38
ARFGEF1Q9Y6D6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.92■■■□□ 2.38
ARFGEF1Q9Y6D6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.92■■■□□ 2.38
ARFGEF1Q9Y6D6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ARFGEF1Q9Y6D6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
ARFGEF1Q9Y6D6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
ARFGEF1Q9Y6D6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ARFGEF1Q9Y6D6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.92■■■□□ 2.38
ARFGEF1Q9Y6D6 MTDHP2-201ENST00000601468 714 ntBASIC29.92■■■□□ 2.38
ARFGEF1Q9Y6D6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
ARFGEF1Q9Y6D6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
ARFGEF1Q9Y6D6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
ARFGEF1Q9Y6D6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ARFGEF1Q9Y6D6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC29.9■■■□□ 2.38
ARFGEF1Q9Y6D6 AC010997.5-201ENST00000609182 354 ntBASIC29.9■■■□□ 2.38
ARFGEF1Q9Y6D6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ARFGEF1Q9Y6D6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.89■■■□□ 2.38
ARFGEF1Q9Y6D6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.89■■■□□ 2.38
ARFGEF1Q9Y6D6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
ARFGEF1Q9Y6D6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.37
ARFGEF1Q9Y6D6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
ARFGEF1Q9Y6D6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.88■■■□□ 2.37
ARFGEF1Q9Y6D6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC29.88■■■□□ 2.37
ARFGEF1Q9Y6D6 SUDS3P1-201ENST00000505831 966 ntBASIC29.88■■■□□ 2.37
ARFGEF1Q9Y6D6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.88■■■□□ 2.37
ARFGEF1Q9Y6D6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
ARFGEF1Q9Y6D6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ARFGEF1Q9Y6D6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC29.87■■■□□ 2.37
ARFGEF1Q9Y6D6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
ARFGEF1Q9Y6D6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
ARFGEF1Q9Y6D6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.87■■■□□ 2.37
ARFGEF1Q9Y6D6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
ARFGEF1Q9Y6D6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.86■■■□□ 2.37
ARFGEF1Q9Y6D6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.86■■■□□ 2.37
ARFGEF1Q9Y6D6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
ARFGEF1Q9Y6D6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.85■■■□□ 2.37
ARFGEF1Q9Y6D6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms