Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC022616.5-201ENST00000518796 181 ntBASIC31.51■■■□□ 2.64
SCN11AQ9UI33 AC131212.1-201ENST00000613771 668 ntBASIC31.51■■■□□ 2.64
SCN11AQ9UI33 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
SCN11AQ9UI33 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SCN11AQ9UI33 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SCN11AQ9UI33 KRT18P10-201ENST00000388836 1287 ntBASIC31.51■■■□□ 2.63
SCN11AQ9UI33 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
SCN11AQ9UI33 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SCN11AQ9UI33 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
SCN11AQ9UI33 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.5■■■□□ 2.63
SCN11AQ9UI33 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SCN11AQ9UI33 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.49■■■□□ 2.63
SCN11AQ9UI33 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SCN11AQ9UI33 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.49■■■□□ 2.63
SCN11AQ9UI33 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.49■■■□□ 2.63
SCN11AQ9UI33 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SCN11AQ9UI33 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCN11AQ9UI33 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.48■■■□□ 2.63
SCN11AQ9UI33 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCN11AQ9UI33 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
SCN11AQ9UI33 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SCN11AQ9UI33 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SCN11AQ9UI33 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
SCN11AQ9UI33 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SCN11AQ9UI33 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.46■■■□□ 2.63
SCN11AQ9UI33 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.46■■■□□ 2.63
SCN11AQ9UI33 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
SCN11AQ9UI33 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SCN11AQ9UI33 AL592295.1-201ENST00000400984 884 ntBASIC31.45■■■□□ 2.63
SCN11AQ9UI33 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.45■■■□□ 2.63
SCN11AQ9UI33 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.63
SCN11AQ9UI33 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.44■■■□□ 2.62
SCN11AQ9UI33 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SCN11AQ9UI33 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SCN11AQ9UI33 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SCN11AQ9UI33 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCN11AQ9UI33 AP004609.3-201ENST00000610705 1884 ntBASIC31.43■■■□□ 2.62
SCN11AQ9UI33 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SCN11AQ9UI33 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.43■■■□□ 2.62
SCN11AQ9UI33 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SCN11AQ9UI33 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.43■■■□□ 2.62
SCN11AQ9UI33 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.43■■■□□ 2.62
SCN11AQ9UI33 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCN11AQ9UI33 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.43■■■□□ 2.62
SCN11AQ9UI33 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
SCN11AQ9UI33 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.42■■■□□ 2.62
SCN11AQ9UI33 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SCN11AQ9UI33 AC142086.6-201ENST00000621154 1765 ntBASIC31.41■■■□□ 2.62
SCN11AQ9UI33 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCN11AQ9UI33 THA1P-201ENST00000590384 1145 ntBASIC31.41■■■□□ 2.62
SCN11AQ9UI33 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
SCN11AQ9UI33 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SCN11AQ9UI33 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.4■■■□□ 2.62
SCN11AQ9UI33 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.4■■■□□ 2.62
SCN11AQ9UI33 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.39■■■□□ 2.62
SCN11AQ9UI33 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SCN11AQ9UI33 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.39■■■□□ 2.61
SCN11AQ9UI33 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SCN11AQ9UI33 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
SCN11AQ9UI33 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
SCN11AQ9UI33 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SCN11AQ9UI33 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
SCN11AQ9UI33 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.38■■■□□ 2.61
SCN11AQ9UI33 AL356441.2-201ENST00000443009 864 ntBASIC31.37■■■□□ 2.61
SCN11AQ9UI33 AC239859.2-201ENST00000444165 318 ntBASIC31.37■■■□□ 2.61
SCN11AQ9UI33 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.37■■■□□ 2.61
SCN11AQ9UI33 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.37■■■□□ 2.61
SCN11AQ9UI33 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCN11AQ9UI33 BX664725.1-201ENST00000438252 379 ntBASIC31.36■■■□□ 2.61
SCN11AQ9UI33 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
SCN11AQ9UI33 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCN11AQ9UI33 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.36■■■□□ 2.61
SCN11AQ9UI33 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.35■■■□□ 2.61
SCN11AQ9UI33 MIR4281-201ENST00000580852 62 ntBASIC31.35■■■□□ 2.61
SCN11AQ9UI33 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SCN11AQ9UI33 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
SCN11AQ9UI33 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.35■■■□□ 2.61
SCN11AQ9UI33 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.35■■■□□ 2.61
SCN11AQ9UI33 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SCN11AQ9UI33 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.35■■■□□ 2.61
SCN11AQ9UI33 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
SCN11AQ9UI33 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.35■■■□□ 2.61
SCN11AQ9UI33 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SCN11AQ9UI33 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.34■■■□□ 2.61
SCN11AQ9UI33 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.34■■■□□ 2.61
SCN11AQ9UI33 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.34■■■□□ 2.61
SCN11AQ9UI33 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SCN11AQ9UI33 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SCN11AQ9UI33 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.33■■■□□ 2.61
SCN11AQ9UI33 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SCN11AQ9UI33 KRT18P24-201ENST00000344739 1156 ntBASIC31.33■■■□□ 2.61
SCN11AQ9UI33 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SCN11AQ9UI33 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
SCN11AQ9UI33 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.33■■■□□ 2.61
SCN11AQ9UI33 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.33■■■□□ 2.61
SCN11AQ9UI33 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.32■■■□□ 2.6
SCN11AQ9UI33 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SCN11AQ9UI33 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.32■■■□□ 2.6
SCN11AQ9UI33 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.31■■■□□ 2.6
SCN11AQ9UI33 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms