Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SND1-IT1Q9HBX3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SND1-IT1Q9HBX3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SND1-IT1Q9HBX3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.93■□□□□ 0.14
SND1-IT1Q9HBX3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SND1-IT1Q9HBX3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SND1-IT1Q9HBX3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SND1-IT1Q9HBX3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC15.93■□□□□ 0.14
SND1-IT1Q9HBX3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SND1-IT1Q9HBX3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SND1-IT1Q9HBX3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SND1-IT1Q9HBX3 PKD1P6-201ENST00000343738 4769 ntBASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC15.92■□□□□ 0.14
SND1-IT1Q9HBX3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SND1-IT1Q9HBX3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SND1-IT1Q9HBX3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC15.91■□□□□ 0.14
SND1-IT1Q9HBX3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC15.91■□□□□ 0.14
SND1-IT1Q9HBX3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SND1-IT1Q9HBX3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.91■□□□□ 0.14
SND1-IT1Q9HBX3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SND1-IT1Q9HBX3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SND1-IT1Q9HBX3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SND1-IT1Q9HBX3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.9■□□□□ 0.14
SND1-IT1Q9HBX3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SND1-IT1Q9HBX3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SND1-IT1Q9HBX3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SND1-IT1Q9HBX3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SND1-IT1Q9HBX3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SND1-IT1Q9HBX3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SND1-IT1Q9HBX3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SND1-IT1Q9HBX3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SND1-IT1Q9HBX3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SND1-IT1Q9HBX3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SND1-IT1Q9HBX3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SND1-IT1Q9HBX3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC15.86■□□□□ 0.13
SND1-IT1Q9HBX3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms