Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 MIR219A2-201ENST00000608502 1504 ntBASIC21.04■□□□□ 0.96
ZCCHC4Q9H5U6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZCCHC4Q9H5U6 AC096887.2-201ENST00000623443 1957 ntBASIC21.03■□□□□ 0.96
ZCCHC4Q9H5U6 AC148477.6-201ENST00000623746 465 ntBASIC21.03■□□□□ 0.96
ZCCHC4Q9H5U6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZCCHC4Q9H5U6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZCCHC4Q9H5U6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZCCHC4Q9H5U6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.02■□□□□ 0.96
ZCCHC4Q9H5U6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.02■□□□□ 0.96
ZCCHC4Q9H5U6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.02■□□□□ 0.96
ZCCHC4Q9H5U6 DUX4L11-201ENST00000611504 1267 ntBASIC21.02■□□□□ 0.96
ZCCHC4Q9H5U6 DUX4L12-201ENST00000614593 1267 ntBASIC21.02■□□□□ 0.96
ZCCHC4Q9H5U6 DUX4L14-201ENST00000621227 1267 ntBASIC21.02■□□□□ 0.96
ZCCHC4Q9H5U6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZCCHC4Q9H5U6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZCCHC4Q9H5U6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZCCHC4Q9H5U6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZCCHC4Q9H5U6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZCCHC4Q9H5U6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZCCHC4Q9H5U6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZCCHC4Q9H5U6 AC012676.1-201ENST00000574705 1949 ntBASIC21.01■□□□□ 0.95
ZCCHC4Q9H5U6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ZCCHC4Q9H5U6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZCCHC4Q9H5U6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ZCCHC4Q9H5U6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZCCHC4Q9H5U6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
ZCCHC4Q9H5U6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZCCHC4Q9H5U6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZCCHC4Q9H5U6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZCCHC4Q9H5U6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZCCHC4Q9H5U6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZCCHC4Q9H5U6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.98■□□□□ 0.95
ZCCHC4Q9H5U6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZCCHC4Q9H5U6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ZCCHC4Q9H5U6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZCCHC4Q9H5U6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZCCHC4Q9H5U6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZCCHC4Q9H5U6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
ZCCHC4Q9H5U6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
ZCCHC4Q9H5U6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZCCHC4Q9H5U6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 AL359258.2-201ENST00000564063 1566 ntBASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 AC133561.1-201ENST00000568600 2415 ntBASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZCCHC4Q9H5U6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZCCHC4Q9H5U6 AP003733.4-201ENST00000623785 1697 ntBASIC20.93■□□□□ 0.94
ZCCHC4Q9H5U6 HLA-V-202ENST00000446817 847 ntBASIC20.93■□□□□ 0.94
ZCCHC4Q9H5U6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZCCHC4Q9H5U6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZCCHC4Q9H5U6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZCCHC4Q9H5U6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZCCHC4Q9H5U6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms