Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX47Q9H0S4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX47Q9H0S4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX47Q9H0S4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
DDX47Q9H0S4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX47Q9H0S4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX47Q9H0S4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX47Q9H0S4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DDX47Q9H0S4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX47Q9H0S4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX47Q9H0S4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DDX47Q9H0S4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX47Q9H0S4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
DDX47Q9H0S4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
DDX47Q9H0S4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
DDX47Q9H0S4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX47Q9H0S4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX47Q9H0S4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.95■■□□□ 1.58
DDX47Q9H0S4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
DDX47Q9H0S4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.95■■□□□ 1.58
DDX47Q9H0S4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX47Q9H0S4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX47Q9H0S4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX47Q9H0S4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.94■■□□□ 1.58
DDX47Q9H0S4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX47Q9H0S4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.94■■□□□ 1.58
DDX47Q9H0S4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX47Q9H0S4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX47Q9H0S4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX47Q9H0S4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX47Q9H0S4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX47Q9H0S4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX47Q9H0S4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX47Q9H0S4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX47Q9H0S4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX47Q9H0S4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DDX47Q9H0S4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DDX47Q9H0S4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX47Q9H0S4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX47Q9H0S4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.92■■□□□ 1.58
DDX47Q9H0S4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DDX47Q9H0S4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.92■■□□□ 1.58
DDX47Q9H0S4 LINC01124-201ENST00000409786 2117 ntBASIC24.92■■□□□ 1.58
DDX47Q9H0S4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX47Q9H0S4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX47Q9H0S4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX47Q9H0S4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX47Q9H0S4 HLA-V-202ENST00000446817 847 ntBASIC24.91■■□□□ 1.58
DDX47Q9H0S4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX47Q9H0S4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DDX47Q9H0S4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
DDX47Q9H0S4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
DDX47Q9H0S4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
DDX47Q9H0S4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
DDX47Q9H0S4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.89■■□□□ 1.58
DDX47Q9H0S4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
DDX47Q9H0S4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.57
DDX47Q9H0S4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
DDX47Q9H0S4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
DDX47Q9H0S4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
DDX47Q9H0S4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
DDX47Q9H0S4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.88■■□□□ 1.57
DDX47Q9H0S4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
DDX47Q9H0S4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
DDX47Q9H0S4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
DDX47Q9H0S4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.87■■□□□ 1.57
DDX47Q9H0S4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
DDX47Q9H0S4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
DDX47Q9H0S4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
DDX47Q9H0S4 DUX4L11-201ENST00000611504 1267 ntBASIC24.87■■□□□ 1.57
DDX47Q9H0S4 DUX4L12-201ENST00000614593 1267 ntBASIC24.87■■□□□ 1.57
DDX47Q9H0S4 DUX4L14-201ENST00000621227 1267 ntBASIC24.87■■□□□ 1.57
DDX47Q9H0S4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.87■■□□□ 1.57
DDX47Q9H0S4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.87■■□□□ 1.57
DDX47Q9H0S4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
DDX47Q9H0S4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
DDX47Q9H0S4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
DDX47Q9H0S4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms