Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 MIR3960-201ENST00000583311 91 ntBASIC25.58■■□□□ 1.69
PCDHB18PQ96TA0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.58■■□□□ 1.69
PCDHB18PQ96TA0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDHB18PQ96TA0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
PCDHB18PQ96TA0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDHB18PQ96TA0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB18PQ96TA0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHB18PQ96TA0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB18PQ96TA0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB18PQ96TA0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB18PQ96TA0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB18PQ96TA0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB18PQ96TA0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHB18PQ96TA0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB18PQ96TA0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB18PQ96TA0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
PCDHB18PQ96TA0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
PCDHB18PQ96TA0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHB18PQ96TA0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB18PQ96TA0 GPX1-201ENST00000419349 1106 ntBASIC25.55■■□□□ 1.68
PCDHB18PQ96TA0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDHB18PQ96TA0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDHB18PQ96TA0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHB18PQ96TA0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB18PQ96TA0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHB18PQ96TA0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHB18PQ96TA0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB18PQ96TA0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB18PQ96TA0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB18PQ96TA0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB18PQ96TA0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB18PQ96TA0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
PCDHB18PQ96TA0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.53■■□□□ 1.68
PCDHB18PQ96TA0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
PCDHB18PQ96TA0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHB18PQ96TA0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
PCDHB18PQ96TA0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
PCDHB18PQ96TA0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHB18PQ96TA0 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHB18PQ96TA0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHB18PQ96TA0 RP9P-202ENST00000450133 1212 ntBASIC25.51■■□□□ 1.67
PCDHB18PQ96TA0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB18PQ96TA0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB18PQ96TA0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB18PQ96TA0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PCDHB18PQ96TA0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDHB18PQ96TA0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 AC022211.4-201ENST00000625094 2161 ntBASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHB18PQ96TA0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHB18PQ96TA0 AC093536.1-201ENST00000569153 554 ntBASIC25.48■■□□□ 1.67
PCDHB18PQ96TA0 AC007029.1-201ENST00000604183 313 ntBASIC25.48■■□□□ 1.67
PCDHB18PQ96TA0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHB18PQ96TA0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.48■■□□□ 1.67
PCDHB18PQ96TA0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDHB18PQ96TA0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.48■■□□□ 1.67
PCDHB18PQ96TA0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB18PQ96TA0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB18PQ96TA0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB18PQ96TA0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB18PQ96TA0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
PCDHB18PQ96TA0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB18PQ96TA0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB18PQ96TA0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB18PQ96TA0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.46■■□□□ 1.67
PCDHB18PQ96TA0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.46■■□□□ 1.67
PCDHB18PQ96TA0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB18PQ96TA0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB18PQ96TA0 AC097639.1-201ENST00000565519 1891 ntBASIC25.46■■□□□ 1.67
PCDHB18PQ96TA0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.67
PCDHB18PQ96TA0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHB18PQ96TA0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDHB18PQ96TA0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHB18PQ96TA0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHB18PQ96TA0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHB18PQ96TA0 AC138932.3-201ENST00000567634 1902 ntBASIC25.44■■□□□ 1.66
PCDHB18PQ96TA0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHB18PQ96TA0 AC142381.3-201ENST00000568208 1670 ntBASIC25.44■■□□□ 1.66
PCDHB18PQ96TA0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.43■■□□□ 1.66
PCDHB18PQ96TA0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB18PQ96TA0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB18PQ96TA0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.43■■□□□ 1.66
PCDHB18PQ96TA0 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.43■■□□□ 1.66
PCDHB18PQ96TA0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB18PQ96TA0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.43■■□□□ 1.66
PCDHB18PQ96TA0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB18PQ96TA0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
PCDHB18PQ96TA0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB18PQ96TA0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB18PQ96TA0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB18PQ96TA0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB18PQ96TA0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms