Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SEH1LQ96EE3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.8■□□□□ 0.92
SEH1LQ96EE3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SEH1LQ96EE3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEH1LQ96EE3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEH1LQ96EE3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEH1LQ96EE3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEH1LQ96EE3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.78■□□□□ 0.92
SEH1LQ96EE3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SEH1LQ96EE3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEH1LQ96EE3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
SEH1LQ96EE3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEH1LQ96EE3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEH1LQ96EE3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEH1LQ96EE3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEH1LQ96EE3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.77■□□□□ 0.92
SEH1LQ96EE3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.77■□□□□ 0.91
SEH1LQ96EE3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SEH1LQ96EE3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SEH1LQ96EE3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.75■□□□□ 0.91
SEH1LQ96EE3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEH1LQ96EE3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SEH1LQ96EE3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SEH1LQ96EE3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.74■□□□□ 0.91
SEH1LQ96EE3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEH1LQ96EE3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.74■□□□□ 0.91
SEH1LQ96EE3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.74■□□□□ 0.91
SEH1LQ96EE3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEH1LQ96EE3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEH1LQ96EE3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEH1LQ96EE3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEH1LQ96EE3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.73■□□□□ 0.91
SEH1LQ96EE3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEH1LQ96EE3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEH1LQ96EE3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEH1LQ96EE3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEH1LQ96EE3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEH1LQ96EE3 AC022211.4-201ENST00000625094 2161 ntBASIC20.72■□□□□ 0.91
SEH1LQ96EE3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEH1LQ96EE3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEH1LQ96EE3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.72■□□□□ 0.91
SEH1LQ96EE3 AC060814.1-201ENST00000554326 538 ntBASIC20.72■□□□□ 0.91
SEH1LQ96EE3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.72■□□□□ 0.91
SEH1LQ96EE3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEH1LQ96EE3 AL139125.2-201ENST00000623134 1869 ntBASIC20.72■□□□□ 0.91
SEH1LQ96EE3 AC138932.3-201ENST00000567634 1902 ntBASIC20.72■□□□□ 0.91
SEH1LQ96EE3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEH1LQ96EE3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SEH1LQ96EE3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEH1LQ96EE3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEH1LQ96EE3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEH1LQ96EE3 AC022413.1-201ENST00000624602 984 ntBASIC20.71■□□□□ 0.91
SEH1LQ96EE3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.71■□□□□ 0.91
SEH1LQ96EE3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEH1LQ96EE3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.7■□□□□ 0.9
SEH1LQ96EE3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEH1LQ96EE3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEH1LQ96EE3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.7■□□□□ 0.9
SEH1LQ96EE3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEH1LQ96EE3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEH1LQ96EE3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEH1LQ96EE3 AL359504.2-201ENST00000605506 1601 ntBASIC20.69■□□□□ 0.9
SEH1LQ96EE3 AC126177.7-201ENST00000547904 679 ntBASIC20.69■□□□□ 0.9
SEH1LQ96EE3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SEH1LQ96EE3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEH1LQ96EE3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SEH1LQ96EE3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEH1LQ96EE3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEH1LQ96EE3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEH1LQ96EE3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 AL157400.5-201ENST00000507624 621 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms