Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TIFAQ96CG3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.14■■□□□ 1.78
TIFAQ96CG3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
TIFAQ96CG3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
TIFAQ96CG3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.13■■□□□ 1.77
TIFAQ96CG3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.13■■□□□ 1.77
TIFAQ96CG3 KRT18P10-201ENST00000388836 1287 ntBASIC26.13■■□□□ 1.77
TIFAQ96CG3 AC010997.5-201ENST00000609182 354 ntBASIC26.13■■□□□ 1.77
TIFAQ96CG3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TIFAQ96CG3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.12■■□□□ 1.77
TIFAQ96CG3 AL356740.2-201ENST00000601559 647 ntBASIC26.12■■□□□ 1.77
TIFAQ96CG3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.12■■□□□ 1.77
TIFAQ96CG3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.11■■□□□ 1.77
TIFAQ96CG3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
TIFAQ96CG3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.11■■□□□ 1.77
TIFAQ96CG3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.11■■□□□ 1.77
TIFAQ96CG3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TIFAQ96CG3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.11■■□□□ 1.77
TIFAQ96CG3 AC104564.3-201ENST00000582367 638 ntBASIC26.11■■□□□ 1.77
TIFAQ96CG3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.11■■□□□ 1.77
TIFAQ96CG3 MIR4466-201ENST00000606121 54 ntBASIC26.11■■□□□ 1.77
TIFAQ96CG3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
TIFAQ96CG3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
TIFAQ96CG3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.1■■□□□ 1.77
TIFAQ96CG3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TIFAQ96CG3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
TIFAQ96CG3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TIFAQ96CG3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TIFAQ96CG3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TIFAQ96CG3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TIFAQ96CG3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.1■■□□□ 1.77
TIFAQ96CG3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
TIFAQ96CG3 MIR6724-1-201ENST00000616420 92 ntBASIC26.1■■□□□ 1.77
TIFAQ96CG3 MIR6724-2-201ENST00000616483 92 ntBASIC26.1■■□□□ 1.77
TIFAQ96CG3 MIR6724-4-201ENST00000617390 92 ntBASIC26.1■■□□□ 1.77
TIFAQ96CG3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TIFAQ96CG3 MIR6724-3-201ENST00000622482 92 ntBASIC26.1■■□□□ 1.77
TIFAQ96CG3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
TIFAQ96CG3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TIFAQ96CG3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TIFAQ96CG3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TIFAQ96CG3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
TIFAQ96CG3 AC026271.2-201ENST00000428091 497 ntBASIC26.08■■□□□ 1.77
TIFAQ96CG3 ST7-AS1-201ENST00000456775 1889 ntBASIC26.08■■□□□ 1.77
TIFAQ96CG3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TIFAQ96CG3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.07■■□□□ 1.76
TIFAQ96CG3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TIFAQ96CG3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.07■■□□□ 1.76
TIFAQ96CG3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
TIFAQ96CG3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TIFAQ96CG3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TIFAQ96CG3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TIFAQ96CG3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.06■■□□□ 1.76
TIFAQ96CG3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.06■■□□□ 1.76
TIFAQ96CG3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TIFAQ96CG3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TIFAQ96CG3 MTDHP2-201ENST00000601468 714 ntBASIC26.05■■□□□ 1.76
TIFAQ96CG3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
TIFAQ96CG3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.04■■□□□ 1.76
TIFAQ96CG3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TIFAQ96CG3 ABCB10P3-201ENST00000561950 2166 ntBASIC26.03■■□□□ 1.76
TIFAQ96CG3 MIR5787-201ENST00000611784 55 ntBASIC26.03■■□□□ 1.76
TIFAQ96CG3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
TIFAQ96CG3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.03■■□□□ 1.76
TIFAQ96CG3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.03■■□□□ 1.76
TIFAQ96CG3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.02■■□□□ 1.76
TIFAQ96CG3 AC142381.2-201ENST00000566120 298 ntBASIC26.02■■□□□ 1.76
TIFAQ96CG3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TIFAQ96CG3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TIFAQ96CG3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TIFAQ96CG3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.01■■□□□ 1.75
TIFAQ96CG3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26■■□□□ 1.75
TIFAQ96CG3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26■■□□□ 1.75
TIFAQ96CG3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TIFAQ96CG3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TIFAQ96CG3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
TIFAQ96CG3 AC135279.3-201ENST00000610945 1311 ntBASIC25.99■■□□□ 1.75
TIFAQ96CG3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
TIFAQ96CG3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.99■■□□□ 1.75
TIFAQ96CG3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.99■■□□□ 1.75
TIFAQ96CG3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.75
TIFAQ96CG3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
TIFAQ96CG3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
TIFAQ96CG3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TIFAQ96CG3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TIFAQ96CG3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TIFAQ96CG3 AC106739.1-201ENST00000617035 715 ntBASIC25.98■■□□□ 1.75
TIFAQ96CG3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.98■■□□□ 1.75
TIFAQ96CG3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TIFAQ96CG3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TIFAQ96CG3 PBX2P1-201ENST00000493219 1291 ntBASIC25.97■■□□□ 1.75
TIFAQ96CG3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TIFAQ96CG3 MIR4281-201ENST00000580852 62 ntBASIC25.97■■□□□ 1.75
TIFAQ96CG3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TIFAQ96CG3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TIFAQ96CG3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
TIFAQ96CG3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TIFAQ96CG3 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.96■■□□□ 1.75
TIFAQ96CG3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.96■■□□□ 1.75
TIFAQ96CG3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms