Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.91■■□□□ 1.1
HTRA1Q92743 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTRA1Q92743 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HTRA1Q92743 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.9■■□□□ 1.1
HTRA1Q92743 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.9■■□□□ 1.1
HTRA1Q92743 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
HTRA1Q92743 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.9■■□□□ 1.1
HTRA1Q92743 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.9■■□□□ 1.1
HTRA1Q92743 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HTRA1Q92743 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTRA1Q92743 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HTRA1Q92743 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.9■■□□□ 1.1
HTRA1Q92743 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HTRA1Q92743 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.89■■□□□ 1.09
HTRA1Q92743 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HTRA1Q92743 WHAMMP3-201ENST00000611636 1609 ntBASIC21.88■■□□□ 1.09
HTRA1Q92743 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HTRA1Q92743 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HTRA1Q92743 AC148477.6-201ENST00000623746 465 ntBASIC21.88■■□□□ 1.09
HTRA1Q92743 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HTRA1Q92743 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
HTRA1Q92743 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTRA1Q92743 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HTRA1Q92743 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HTRA1Q92743 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HTRA1Q92743 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
HTRA1Q92743 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HTRA1Q92743 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
HTRA1Q92743 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.86■■□□□ 1.09
HTRA1Q92743 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HTRA1Q92743 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.86■■□□□ 1.09
HTRA1Q92743 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HTRA1Q92743 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HTRA1Q92743 DUSP8P4-201ENST00000399538 1761 ntBASIC21.85■■□□□ 1.09
HTRA1Q92743 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.85■■□□□ 1.09
HTRA1Q92743 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.85■■□□□ 1.09
HTRA1Q92743 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.85■■□□□ 1.09
HTRA1Q92743 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HTRA1Q92743 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HTRA1Q92743 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HTRA1Q92743 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HTRA1Q92743 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.84■■□□□ 1.09
HTRA1Q92743 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HTRA1Q92743 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HTRA1Q92743 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.84■■□□□ 1.09
HTRA1Q92743 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HTRA1Q92743 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HTRA1Q92743 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.84■■□□□ 1.09
HTRA1Q92743 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
HTRA1Q92743 AP004609.3-201ENST00000610705 1884 ntBASIC21.83■■□□□ 1.09
HTRA1Q92743 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
HTRA1Q92743 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.83■■□□□ 1.09
HTRA1Q92743 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HTRA1Q92743 AC012676.1-201ENST00000574705 1949 ntBASIC21.83■■□□□ 1.09
HTRA1Q92743 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
HTRA1Q92743 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
HTRA1Q92743 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HTRA1Q92743 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HTRA1Q92743 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.83■■□□□ 1.08
HTRA1Q92743 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HTRA1Q92743 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HTRA1Q92743 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HTRA1Q92743 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HTRA1Q92743 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.82■■□□□ 1.08
HTRA1Q92743 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.82■■□□□ 1.08
HTRA1Q92743 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HTRA1Q92743 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.82■■□□□ 1.08
HTRA1Q92743 ERN1-208ENST00000606895 2068 ntBASIC21.82■■□□□ 1.08
HTRA1Q92743 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HTRA1Q92743 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HTRA1Q92743 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
HTRA1Q92743 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HTRA1Q92743 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
HTRA1Q92743 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.81■■□□□ 1.08
HTRA1Q92743 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.81■■□□□ 1.08
HTRA1Q92743 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.81■■□□□ 1.08
HTRA1Q92743 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HTRA1Q92743 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HTRA1Q92743 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HTRA1Q92743 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms