Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.94■■□□□ 1.58
CCHCR1Q8TD31 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCHCR1Q8TD31 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CCHCR1Q8TD31 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.93■■□□□ 1.58
CCHCR1Q8TD31 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
CCHCR1Q8TD31 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCHCR1Q8TD31 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCHCR1Q8TD31 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCHCR1Q8TD31 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CCHCR1Q8TD31 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCHCR1Q8TD31 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCHCR1Q8TD31 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCHCR1Q8TD31 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCHCR1Q8TD31 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCHCR1Q8TD31 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCHCR1Q8TD31 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
CCHCR1Q8TD31 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CCHCR1Q8TD31 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.9■■□□□ 1.58
CCHCR1Q8TD31 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCHCR1Q8TD31 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CCHCR1Q8TD31 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CCHCR1Q8TD31 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CCHCR1Q8TD31 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.89■■□□□ 1.58
CCHCR1Q8TD31 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
CCHCR1Q8TD31 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
CCHCR1Q8TD31 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCHCR1Q8TD31 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCHCR1Q8TD31 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.88■■□□□ 1.57
CCHCR1Q8TD31 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.88■■□□□ 1.57
CCHCR1Q8TD31 AL359258.2-201ENST00000564063 1566 ntBASIC24.88■■□□□ 1.57
CCHCR1Q8TD31 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.87■■□□□ 1.57
CCHCR1Q8TD31 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.87■■□□□ 1.57
CCHCR1Q8TD31 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.87■■□□□ 1.57
CCHCR1Q8TD31 AC022413.1-201ENST00000624602 984 ntBASIC24.87■■□□□ 1.57
CCHCR1Q8TD31 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCHCR1Q8TD31 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.87■■□□□ 1.57
CCHCR1Q8TD31 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCHCR1Q8TD31 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.86■■□□□ 1.57
CCHCR1Q8TD31 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.86■■□□□ 1.57
CCHCR1Q8TD31 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.86■■□□□ 1.57
CCHCR1Q8TD31 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCHCR1Q8TD31 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCHCR1Q8TD31 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCHCR1Q8TD31 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CCHCR1Q8TD31 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.85■■□□□ 1.57
CCHCR1Q8TD31 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CCHCR1Q8TD31 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.85■■□□□ 1.57
CCHCR1Q8TD31 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CCHCR1Q8TD31 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.85■■□□□ 1.57
CCHCR1Q8TD31 AC096887.2-201ENST00000623443 1957 ntBASIC24.85■■□□□ 1.57
CCHCR1Q8TD31 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCHCR1Q8TD31 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCHCR1Q8TD31 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCHCR1Q8TD31 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CCHCR1Q8TD31 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCHCR1Q8TD31 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCHCR1Q8TD31 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CCHCR1Q8TD31 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCHCR1Q8TD31 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCHCR1Q8TD31 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CCHCR1Q8TD31 AC022211.4-201ENST00000625094 2161 ntBASIC24.83■■□□□ 1.57
CCHCR1Q8TD31 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.83■■□□□ 1.57
CCHCR1Q8TD31 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCHCR1Q8TD31 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCHCR1Q8TD31 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.83■■□□□ 1.56
CCHCR1Q8TD31 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCHCR1Q8TD31 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCHCR1Q8TD31 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCHCR1Q8TD31 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCHCR1Q8TD31 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCHCR1Q8TD31 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.82■■□□□ 1.56
CCHCR1Q8TD31 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CCHCR1Q8TD31 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCHCR1Q8TD31 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCHCR1Q8TD31 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
CCHCR1Q8TD31 GPX1-201ENST00000419349 1106 ntBASIC24.81■■□□□ 1.56
CCHCR1Q8TD31 AC060814.1-201ENST00000554326 538 ntBASIC24.81■■□□□ 1.56
CCHCR1Q8TD31 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCHCR1Q8TD31 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCHCR1Q8TD31 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCHCR1Q8TD31 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCHCR1Q8TD31 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CCHCR1Q8TD31 AL359504.2-201ENST00000605506 1601 ntBASIC24.8■■□□□ 1.56
CCHCR1Q8TD31 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CCHCR1Q8TD31 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCHCR1Q8TD31 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CCHCR1Q8TD31 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.79■■□□□ 1.56
CCHCR1Q8TD31 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCHCR1Q8TD31 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.79■■□□□ 1.56
CCHCR1Q8TD31 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.79■■□□□ 1.56
CCHCR1Q8TD31 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
CCHCR1Q8TD31 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCHCR1Q8TD31 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.78■■□□□ 1.56
CCHCR1Q8TD31 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms