Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM4Q86VH4 KRT18P10-201ENST00000388836 1287 ntBASIC23.68■■□□□ 1.38
LRRTM4Q86VH4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
LRRTM4Q86VH4 AC139795.1-202ENST00000500444 432 ntBASIC23.68■■□□□ 1.38
LRRTM4Q86VH4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.68■■□□□ 1.38
LRRTM4Q86VH4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM4Q86VH4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.68■■□□□ 1.38
LRRTM4Q86VH4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM4Q86VH4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRTM4Q86VH4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRRTM4Q86VH4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRRTM4Q86VH4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRTM4Q86VH4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRTM4Q86VH4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRTM4Q86VH4 BHLHE23-202ENST00000612929 1109 ntBASIC23.67■■□□□ 1.38
LRRTM4Q86VH4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRTM4Q86VH4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.66■■□□□ 1.38
LRRTM4Q86VH4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
LRRTM4Q86VH4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRTM4Q86VH4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRTM4Q86VH4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRTM4Q86VH4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRTM4Q86VH4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRRTM4Q86VH4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
LRRTM4Q86VH4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.65■■□□□ 1.38
LRRTM4Q86VH4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRTM4Q86VH4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
LRRTM4Q86VH4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRTM4Q86VH4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRTM4Q86VH4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
LRRTM4Q86VH4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LRRTM4Q86VH4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.64■■□□□ 1.38
LRRTM4Q86VH4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LRRTM4Q86VH4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.64■■□□□ 1.37
LRRTM4Q86VH4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 RPS2P7-201ENST00000447334 885 ntBASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LRRTM4Q86VH4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRTM4Q86VH4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRTM4Q86VH4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.62■■□□□ 1.37
LRRTM4Q86VH4 AC074183.2-201ENST00000623112 922 ntBASIC23.62■■□□□ 1.37
LRRTM4Q86VH4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
LRRTM4Q86VH4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRTM4Q86VH4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
LRRTM4Q86VH4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.61■■□□□ 1.37
LRRTM4Q86VH4 AC087393.1-201ENST00000582896 145 ntBASIC23.61■■□□□ 1.37
LRRTM4Q86VH4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRTM4Q86VH4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.6■■□□□ 1.37
LRRTM4Q86VH4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
LRRTM4Q86VH4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.6■■□□□ 1.37
LRRTM4Q86VH4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRRTM4Q86VH4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRRTM4Q86VH4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.6■■□□□ 1.37
LRRTM4Q86VH4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
LRRTM4Q86VH4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.59■■□□□ 1.37
LRRTM4Q86VH4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.59■■□□□ 1.37
LRRTM4Q86VH4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRTM4Q86VH4 AC092803.2-201ENST00000564287 1899 ntBASIC23.59■■□□□ 1.37
LRRTM4Q86VH4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
LRRTM4Q86VH4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
LRRTM4Q86VH4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.59■■□□□ 1.37
LRRTM4Q86VH4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.58■■□□□ 1.36
LRRTM4Q86VH4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LRRTM4Q86VH4 ERN1-208ENST00000606895 2068 ntBASIC23.57■■□□□ 1.36
LRRTM4Q86VH4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRTM4Q86VH4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRRTM4Q86VH4 AC010980.1-201ENST00000587192 1142 ntBASIC23.57■■□□□ 1.36
LRRTM4Q86VH4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRTM4Q86VH4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.56■■□□□ 1.36
LRRTM4Q86VH4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRRTM4Q86VH4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.56■■□□□ 1.36
LRRTM4Q86VH4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRRTM4Q86VH4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.56■■□□□ 1.36
LRRTM4Q86VH4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRTM4Q86VH4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRTM4Q86VH4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRTM4Q86VH4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.55■■□□□ 1.36
LRRTM4Q86VH4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LRRTM4Q86VH4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LRRTM4Q86VH4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRTM4Q86VH4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
LRRTM4Q86VH4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
LRRTM4Q86VH4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRTM4Q86VH4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRTM4Q86VH4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.54■■□□□ 1.36
LRRTM4Q86VH4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.54■■□□□ 1.36
LRRTM4Q86VH4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.54■■□□□ 1.36
LRRTM4Q86VH4 AC010501.1-201ENST00000606270 1962 ntBASIC23.54■■□□□ 1.36
LRRTM4Q86VH4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRRTM4Q86VH4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRTM4Q86VH4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms