Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SHFQ7M4L6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHFQ7M4L6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHFQ7M4L6 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.58■■□□□ 1.05
SHFQ7M4L6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.58■■□□□ 1.05
SHFQ7M4L6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHFQ7M4L6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.58■■□□□ 1.04
SHFQ7M4L6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHFQ7M4L6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHFQ7M4L6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHFQ7M4L6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.57■■□□□ 1.04
SHFQ7M4L6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHFQ7M4L6 ZNRF2P2-203ENST00000454624 420 ntBASIC21.57■■□□□ 1.04
SHFQ7M4L6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.57■■□□□ 1.04
SHFQ7M4L6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.57■■□□□ 1.04
SHFQ7M4L6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHFQ7M4L6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHFQ7M4L6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHFQ7M4L6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHFQ7M4L6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHFQ7M4L6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.56■■□□□ 1.04
SHFQ7M4L6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHFQ7M4L6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHFQ7M4L6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.56■■□□□ 1.04
SHFQ7M4L6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHFQ7M4L6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHFQ7M4L6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHFQ7M4L6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.55■■□□□ 1.04
SHFQ7M4L6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.55■■□□□ 1.04
SHFQ7M4L6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.55■■□□□ 1.04
SHFQ7M4L6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.55■■□□□ 1.04
SHFQ7M4L6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHFQ7M4L6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.54■■□□□ 1.04
SHFQ7M4L6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
SHFQ7M4L6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHFQ7M4L6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.54■■□□□ 1.04
SHFQ7M4L6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHFQ7M4L6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHFQ7M4L6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.54■■□□□ 1.04
SHFQ7M4L6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHFQ7M4L6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHFQ7M4L6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SHFQ7M4L6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHFQ7M4L6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHFQ7M4L6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHFQ7M4L6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHFQ7M4L6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SHFQ7M4L6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SHFQ7M4L6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.52■■□□□ 1.04
SHFQ7M4L6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHFQ7M4L6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHFQ7M4L6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHFQ7M4L6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHFQ7M4L6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHFQ7M4L6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHFQ7M4L6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHFQ7M4L6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHFQ7M4L6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHFQ7M4L6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.51■■□□□ 1.03
SHFQ7M4L6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SHFQ7M4L6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHFQ7M4L6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SHFQ7M4L6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.51■■□□□ 1.03
SHFQ7M4L6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHFQ7M4L6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.51■■□□□ 1.03
SHFQ7M4L6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHFQ7M4L6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHFQ7M4L6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHFQ7M4L6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.5■■□□□ 1.03
SHFQ7M4L6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.5■■□□□ 1.03
SHFQ7M4L6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHFQ7M4L6 AL359258.2-201ENST00000564063 1566 ntBASIC21.5■■□□□ 1.03
SHFQ7M4L6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.5■■□□□ 1.03
SHFQ7M4L6 HLA-V-202ENST00000446817 847 ntBASIC21.5■■□□□ 1.03
SHFQ7M4L6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.5■■□□□ 1.03
SHFQ7M4L6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHFQ7M4L6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHFQ7M4L6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.5■■□□□ 1.03
SHFQ7M4L6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SHFQ7M4L6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHFQ7M4L6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.49■■□□□ 1.03
SHFQ7M4L6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SHFQ7M4L6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHFQ7M4L6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHFQ7M4L6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SHFQ7M4L6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHFQ7M4L6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHFQ7M4L6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHFQ7M4L6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SHFQ7M4L6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SHFQ7M4L6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHFQ7M4L6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHFQ7M4L6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHFQ7M4L6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.48■■□□□ 1.03
SHFQ7M4L6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHFQ7M4L6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHFQ7M4L6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHFQ7M4L6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHFQ7M4L6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHFQ7M4L6 AL359504.2-201ENST00000605506 1601 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms