Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC37.53■■■■□ 3.6
CD109Q6YHK3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CD109Q6YHK3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CD109Q6YHK3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC37.53■■■■□ 3.6
CD109Q6YHK3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CD109Q6YHK3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC37.53■■■■□ 3.6
CD109Q6YHK3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CD109Q6YHK3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC37.53■■■■□ 3.6
CD109Q6YHK3 AC026271.2-201ENST00000428091 497 ntBASIC37.53■■■■□ 3.6
CD109Q6YHK3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CD109Q6YHK3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC37.53■■■■□ 3.6
CD109Q6YHK3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC37.53■■■■□ 3.6
CD109Q6YHK3 MIR6724-1-201ENST00000616420 92 ntBASIC37.53■■■■□ 3.6
CD109Q6YHK3 MIR6724-2-201ENST00000616483 92 ntBASIC37.53■■■■□ 3.6
CD109Q6YHK3 MIR6724-4-201ENST00000617390 92 ntBASIC37.53■■■■□ 3.6
CD109Q6YHK3 MIR6724-3-201ENST00000622482 92 ntBASIC37.53■■■■□ 3.6
CD109Q6YHK3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC37.52■■■■□ 3.6
CD109Q6YHK3 KRT18P10-201ENST00000388836 1287 ntBASIC37.52■■■■□ 3.6
CD109Q6YHK3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
CD109Q6YHK3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC37.52■■■■□ 3.6
CD109Q6YHK3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC37.51■■■■□ 3.6
CD109Q6YHK3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
CD109Q6YHK3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
CD109Q6YHK3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC37.5■■■■□ 3.59
CD109Q6YHK3 AC010997.5-201ENST00000609182 354 ntBASIC37.5■■■■□ 3.59
CD109Q6YHK3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC37.5■■■■□ 3.59
CD109Q6YHK3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC37.5■■■■□ 3.59
CD109Q6YHK3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
CD109Q6YHK3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC37.48■■■■□ 3.59
CD109Q6YHK3 AL512631.2-201ENST00000604634 923 ntBASIC37.48■■■■□ 3.59
CD109Q6YHK3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
CD109Q6YHK3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC37.47■■■■□ 3.59
CD109Q6YHK3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
CD109Q6YHK3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC37.47■■■■□ 3.59
CD109Q6YHK3 MIR4281-201ENST00000580852 62 ntBASIC37.47■■■■□ 3.59
CD109Q6YHK3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
CD109Q6YHK3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC37.46■■■■□ 3.59
CD109Q6YHK3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
CD109Q6YHK3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
CD109Q6YHK3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC37.45■■■■□ 3.59
CD109Q6YHK3 AL139393.2-201ENST00000608721 2025 ntBASIC37.45■■■■□ 3.59
CD109Q6YHK3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC37.45■■■■□ 3.59
CD109Q6YHK3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC37.45■■■■□ 3.58
CD109Q6YHK3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
CD109Q6YHK3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC37.44■■■■□ 3.58
CD109Q6YHK3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
CD109Q6YHK3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC37.44■■■■□ 3.58
CD109Q6YHK3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC37.43■■■■□ 3.58
CD109Q6YHK3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC37.43■■■■□ 3.58
CD109Q6YHK3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC37.43■■■■□ 3.58
CD109Q6YHK3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC37.43■■■■□ 3.58
CD109Q6YHK3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
CD109Q6YHK3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC37.43■■■■□ 3.58
CD109Q6YHK3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC37.43■■■■□ 3.58
CD109Q6YHK3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC37.42■■■■□ 3.58
CD109Q6YHK3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
CD109Q6YHK3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC37.41■■■■□ 3.58
CD109Q6YHK3 AL356740.2-201ENST00000601559 647 ntBASIC37.41■■■■□ 3.58
CD109Q6YHK3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
CD109Q6YHK3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
CD109Q6YHK3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC37.4■■■■□ 3.58
CD109Q6YHK3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC37.4■■■■□ 3.58
CD109Q6YHK3 AC104564.3-201ENST00000582367 638 ntBASIC37.4■■■■□ 3.58
CD109Q6YHK3 MTDHP2-201ENST00000601468 714 ntBASIC37.4■■■■□ 3.58
CD109Q6YHK3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC37.4■■■■□ 3.58
CD109Q6YHK3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC37.4■■■■□ 3.58
CD109Q6YHK3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC37.4■■■■□ 3.58
CD109Q6YHK3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC37.39■■■■□ 3.58
CD109Q6YHK3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
CD109Q6YHK3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
CD109Q6YHK3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC37.38■■■■□ 3.57
CD109Q6YHK3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
CD109Q6YHK3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
CD109Q6YHK3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CD109Q6YHK3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
CD109Q6YHK3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC37.35■■■■□ 3.57
CD109Q6YHK3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC37.35■■■■□ 3.57
CD109Q6YHK3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
CD109Q6YHK3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
CD109Q6YHK3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC37.34■■■■□ 3.57
CD109Q6YHK3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC37.33■■■■□ 3.57
CD109Q6YHK3 AC135279.3-201ENST00000610945 1311 ntBASIC37.32■■■■□ 3.57
CD109Q6YHK3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC37.32■■■■□ 3.57
CD109Q6YHK3 AC106739.1-201ENST00000617035 715 ntBASIC37.32■■■■□ 3.56
CD109Q6YHK3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC37.31■■■■□ 3.56
CD109Q6YHK3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC37.31■■■■□ 3.56
CD109Q6YHK3 RASSF1-AS1-201ENST00000629828 790 ntBASIC37.31■■■■□ 3.56
CD109Q6YHK3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC37.31■■■■□ 3.56
CD109Q6YHK3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC37.3■■■■□ 3.56
CD109Q6YHK3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC37.3■■■■□ 3.56
CD109Q6YHK3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC37.29■■■■□ 3.56
CD109Q6YHK3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
CD109Q6YHK3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC37.28■■■■□ 3.56
CD109Q6YHK3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CD109Q6YHK3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC37.27■■■■□ 3.56
CD109Q6YHK3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
CD109Q6YHK3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CD109Q6YHK3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
CD109Q6YHK3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC37.26■■■■□ 3.56
CD109Q6YHK3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC37.26■■■■□ 3.55
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms