Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LINC01554Q52M75 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01554Q52M75 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01554Q52M75 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
LINC01554Q52M75 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01554Q52M75 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
LINC01554Q52M75 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01554Q52M75 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01554Q52M75 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01554Q52M75 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01554Q52M75 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01554Q52M75 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01554Q52M75 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
LINC01554Q52M75 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LINC01554Q52M75 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC01554Q52M75 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LINC01554Q52M75 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LINC01554Q52M75 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01554Q52M75 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01554Q52M75 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC11.97□□□□□ -0.49
LINC01554Q52M75 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01554Q52M75 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01554Q52M75 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
LINC01554Q52M75 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01554Q52M75 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01554Q52M75 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01554Q52M75 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
LINC01554Q52M75 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01554Q52M75 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
LINC01554Q52M75 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01554Q52M75 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01554Q52M75 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01554Q52M75 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC11.96□□□□□ -0.5
LINC01554Q52M75 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01554Q52M75 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC11.96□□□□□ -0.5
LINC01554Q52M75 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01554Q52M75 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01554Q52M75 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01554Q52M75 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01554Q52M75 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC11.96□□□□□ -0.5
LINC01554Q52M75 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC01554Q52M75 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC01554Q52M75 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
LINC01554Q52M75 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC01554Q52M75 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC01554Q52M75 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01554Q52M75 AC068473.5-201ENST00000616428 2072 ntBASIC11.95□□□□□ -0.5
LINC01554Q52M75 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC01554Q52M75 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01554Q52M75 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC01554Q52M75 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01554Q52M75 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01554Q52M75 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LINC01554Q52M75 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01554Q52M75 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01554Q52M75 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01554Q52M75 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01554Q52M75 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01554Q52M75 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC01554Q52M75 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01554Q52M75 AC092803.2-201ENST00000564287 1899 ntBASIC11.93□□□□□ -0.5
LINC01554Q52M75 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01554Q52M75 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01554Q52M75 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01554Q52M75 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC01554Q52M75 EBPL-203ENST00000378270 579 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC01554Q52M75 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
LINC01554Q52M75 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms