Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CKS1BP61024 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKS1BP61024 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKS1BP61024 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.56■□□□□ 0.24
CKS1BP61024 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.56■□□□□ 0.24
CKS1BP61024 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKS1BP61024 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.56■□□□□ 0.24
CKS1BP61024 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CKS1BP61024 SUZ12P1-203ENST00000578195 985 ntBASIC16.56■□□□□ 0.24
CKS1BP61024 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.56■□□□□ 0.24
CKS1BP61024 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKS1BP61024 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKS1BP61024 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKS1BP61024 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKS1BP61024 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.55■□□□□ 0.24
CKS1BP61024 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.55■□□□□ 0.24
CKS1BP61024 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKS1BP61024 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKS1BP61024 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKS1BP61024 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKS1BP61024 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CKS1BP61024 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CKS1BP61024 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKS1BP61024 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKS1BP61024 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKS1BP61024 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKS1BP61024 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.54■□□□□ 0.24
CKS1BP61024 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.54■□□□□ 0.24
CKS1BP61024 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.54■□□□□ 0.24
CKS1BP61024 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.54■□□□□ 0.24
CKS1BP61024 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CKS1BP61024 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKS1BP61024 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CKS1BP61024 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKS1BP61024 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.54■□□□□ 0.24
CKS1BP61024 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.54■□□□□ 0.24
CKS1BP61024 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKS1BP61024 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKS1BP61024 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKS1BP61024 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKS1BP61024 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKS1BP61024 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKS1BP61024 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKS1BP61024 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKS1BP61024 AP004609.3-201ENST00000610705 1884 ntBASIC16.52■□□□□ 0.24
CKS1BP61024 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
CKS1BP61024 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.52■□□□□ 0.24
CKS1BP61024 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.52■□□□□ 0.24
CKS1BP61024 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKS1BP61024 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CKS1BP61024 MIR6090-201ENST00000622481 60 ntBASIC16.52■□□□□ 0.24
CKS1BP61024 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.52■□□□□ 0.24
CKS1BP61024 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKS1BP61024 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKS1BP61024 PKD1P6-201ENST00000343738 4769 ntBASIC16.52■□□□□ 0.23
CKS1BP61024 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKS1BP61024 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CKS1BP61024 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CKS1BP61024 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CKS1BP61024 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CKS1BP61024 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKS1BP61024 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CKS1BP61024 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.51■□□□□ 0.23
CKS1BP61024 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
CKS1BP61024 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.5■□□□□ 0.23
CKS1BP61024 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKS1BP61024 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKS1BP61024 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CKS1BP61024 AC092803.2-201ENST00000564287 1899 ntBASIC16.5■□□□□ 0.23
CKS1BP61024 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CKS1BP61024 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKS1BP61024 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKS1BP61024 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CKS1BP61024 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKS1BP61024 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.49■□□□□ 0.23
CKS1BP61024 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKS1BP61024 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKS1BP61024 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKS1BP61024 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.49■□□□□ 0.23
CKS1BP61024 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CKS1BP61024 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKS1BP61024 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS1BP61024 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS1BP61024 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKS1BP61024 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CKS1BP61024 C9orf163-202ENST00000624034 2573 ntBASIC16.48■□□□□ 0.23
CKS1BP61024 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CKS1BP61024 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CKS1BP61024 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.48■□□□□ 0.23
CKS1BP61024 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKS1BP61024 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.48■□□□□ 0.23
CKS1BP61024 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS1BP61024 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CKS1BP61024 MIR3665-201ENST00000578708 105 ntBASIC16.47■□□□□ 0.23
CKS1BP61024 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.47■□□□□ 0.23
CKS1BP61024 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS1BP61024 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CKS1BP61024 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CKS1BP61024 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS1BP61024 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms