Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
SMIM11AP58511 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM11AP58511 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM11AP58511 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.06■■□□□ 1.12
SMIM11AP58511 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM11AP58511 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.05■■□□□ 1.12
SMIM11AP58511 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.05■■□□□ 1.12
SMIM11AP58511 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.05■■□□□ 1.12
SMIM11AP58511 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
SMIM11AP58511 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SMIM11AP58511 AC126177.7-201ENST00000547904 679 ntBASIC22.05■■□□□ 1.12
SMIM11AP58511 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMIM11AP58511 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMIM11AP58511 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMIM11AP58511 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.05■■□□□ 1.12
SMIM11AP58511 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMIM11AP58511 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.04■■□□□ 1.12
SMIM11AP58511 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMIM11AP58511 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.04■■□□□ 1.12
SMIM11AP58511 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMIM11AP58511 HLA-V-202ENST00000446817 847 ntBASIC22.04■■□□□ 1.12
SMIM11AP58511 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.04■■□□□ 1.12
SMIM11AP58511 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMIM11AP58511 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMIM11AP58511 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SMIM11AP58511 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMIM11AP58511 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
SMIM11AP58511 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMIM11AP58511 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.02■■□□□ 1.12
SMIM11AP58511 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMIM11AP58511 AP003733.4-201ENST00000623785 1697 ntBASIC22.02■■□□□ 1.12
SMIM11AP58511 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.02■■□□□ 1.12
SMIM11AP58511 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SMIM11AP58511 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.02■■□□□ 1.11
SMIM11AP58511 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.01■■□□□ 1.11
SMIM11AP58511 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMIM11AP58511 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.01■■□□□ 1.11
SMIM11AP58511 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.01■■□□□ 1.11
SMIM11AP58511 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SMIM11AP58511 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SMIM11AP58511 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22■■□□□ 1.11
SMIM11AP58511 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMIM11AP58511 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22■■□□□ 1.11
SMIM11AP58511 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMIM11AP58511 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
SMIM11AP58511 AC097639.1-201ENST00000565519 1891 ntBASIC22■■□□□ 1.11
SMIM11AP58511 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMIM11AP58511 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
SMIM11AP58511 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMIM11AP58511 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SMIM11AP58511 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.99■■□□□ 1.11
SMIM11AP58511 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.99■■□□□ 1.11
SMIM11AP58511 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMIM11AP58511 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.99■■□□□ 1.11
SMIM11AP58511 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.99■■□□□ 1.11
SMIM11AP58511 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMIM11AP58511 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMIM11AP58511 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.99■■□□□ 1.11
SMIM11AP58511 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMIM11AP58511 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.98■■□□□ 1.11
SMIM11AP58511 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM11AP58511 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM11AP58511 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM11AP58511 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM11AP58511 RPS2P35-201ENST00000443417 897 ntBASIC21.98■■□□□ 1.11
SMIM11AP58511 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SMIM11AP58511 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
SMIM11AP58511 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM11AP58511 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM11AP58511 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM11AP58511 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.97■■□□□ 1.11
SMIM11AP58511 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM11AP58511 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM11AP58511 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.96■■□□□ 1.11
SMIM11AP58511 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM11AP58511 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.96■■□□□ 1.11
SMIM11AP58511 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM11AP58511 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM11AP58511 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM11AP58511 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM11AP58511 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM11AP58511 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM11AP58511 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM11AP58511 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM11AP58511 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM11AP58511 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM11AP58511 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM11AP58511 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.94■■□□□ 1.1
SMIM11AP58511 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SMIM11AP58511 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SMIM11AP58511 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM11AP58511 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM11AP58511 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM11AP58511 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM11AP58511 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM11AP58511 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM11AP58511 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM11AP58511 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM11AP58511 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.93■■□□□ 1.1
SMIM11AP58511 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms