Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MRPL3P09001 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.44■■□□□ 1.02
MRPL3P09001 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MRPL3P09001 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRPL3P09001 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRPL3P09001 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRPL3P09001 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRPL3P09001 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.43■■□□□ 1.02
MRPL3P09001 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRPL3P09001 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRPL3P09001 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.42■■□□□ 1.02
MRPL3P09001 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MRPL3P09001 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MRPL3P09001 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.42■■□□□ 1.02
MRPL3P09001 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
MRPL3P09001 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MRPL3P09001 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRPL3P09001 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRPL3P09001 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRPL3P09001 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRPL3P09001 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.41■■□□□ 1.02
MRPL3P09001 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
MRPL3P09001 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRPL3P09001 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRPL3P09001 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRPL3P09001 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
MRPL3P09001 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRPL3P09001 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MRPL3P09001 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MRPL3P09001 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MRPL3P09001 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MRPL3P09001 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MRPL3P09001 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MRPL3P09001 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
MRPL3P09001 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MRPL3P09001 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MRPL3P09001 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.39■■□□□ 1.01
MRPL3P09001 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MRPL3P09001 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.39■■□□□ 1.01
MRPL3P09001 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MRPL3P09001 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.39■■□□□ 1.01
MRPL3P09001 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.39■■□□□ 1.01
MRPL3P09001 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
MRPL3P09001 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MRPL3P09001 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MRPL3P09001 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MRPL3P09001 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MRPL3P09001 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.38■■□□□ 1.01
MRPL3P09001 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MRPL3P09001 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MRPL3P09001 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MRPL3P09001 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MRPL3P09001 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
MRPL3P09001 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
MRPL3P09001 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MRPL3P09001 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
MRPL3P09001 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MRPL3P09001 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MRPL3P09001 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.36■■□□□ 1.01
MRPL3P09001 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MRPL3P09001 ZNRF2P2-203ENST00000454624 420 ntBASIC21.36■■□□□ 1.01
MRPL3P09001 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.36■■□□□ 1.01
MRPL3P09001 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MRPL3P09001 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MRPL3P09001 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MRPL3P09001 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MRPL3P09001 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MRPL3P09001 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MRPL3P09001 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MRPL3P09001 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.35■■□□□ 1.01
MRPL3P09001 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MRPL3P09001 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.35■■□□□ 1.01
MRPL3P09001 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
MRPL3P09001 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.35■■□□□ 1.01
MRPL3P09001 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MRPL3P09001 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MRPL3P09001 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MRPL3P09001 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MRPL3P09001 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MRPL3P09001 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.34■■□□□ 1.01
MRPL3P09001 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MRPL3P09001 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.34■■□□□ 1.01
MRPL3P09001 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MRPL3P09001 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MRPL3P09001 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MRPL3P09001 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.33■■□□□ 1.01
MRPL3P09001 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.33■■□□□ 1
MRPL3P09001 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.32■■□□□ 1
MRPL3P09001 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MRPL3P09001 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.32■■□□□ 1
MRPL3P09001 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRPL3P09001 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.32■■□□□ 1
MRPL3P09001 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRPL3P09001 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
MRPL3P09001 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.31■■□□□ 1
MRPL3P09001 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPL3P09001 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRPL3P09001 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MRPL3P09001 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.31■■□□□ 1
MRPL3P09001 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms