Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
RAPGEF3O95398 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
RAPGEF3O95398 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
RAPGEF3O95398 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
RAPGEF3O95398 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC36.98■■■■□ 3.51
RAPGEF3O95398 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC36.98■■■■□ 3.51
RAPGEF3O95398 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
RAPGEF3O95398 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC36.97■■■■□ 3.51
RAPGEF3O95398 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
RAPGEF3O95398 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
RAPGEF3O95398 AL139393.2-201ENST00000608721 2025 ntBASIC36.97■■■■□ 3.51
RAPGEF3O95398 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
RAPGEF3O95398 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC36.96■■■■□ 3.51
RAPGEF3O95398 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
RAPGEF3O95398 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC36.96■■■■□ 3.51
RAPGEF3O95398 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC36.96■■■■□ 3.51
RAPGEF3O95398 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC36.96■■■■□ 3.51
RAPGEF3O95398 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC36.95■■■■□ 3.51
RAPGEF3O95398 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
RAPGEF3O95398 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC36.94■■■■□ 3.5
RAPGEF3O95398 AC010997.5-201ENST00000609182 354 ntBASIC36.94■■■■□ 3.5
RAPGEF3O95398 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC36.94■■■■□ 3.5
RAPGEF3O95398 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC36.93■■■■□ 3.5
RAPGEF3O95398 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
RAPGEF3O95398 LSM4-201ENST00000252816 986 ntTSL 2 BASIC36.92■■■■□ 3.5
RAPGEF3O95398 QDPR-206ENST00000508623 601 ntTSL 3 BASIC36.92■■■■□ 3.5
RAPGEF3O95398 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
RAPGEF3O95398 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC36.92■■■■□ 3.5
RAPGEF3O95398 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC36.91■■■■□ 3.5
RAPGEF3O95398 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC36.91■■■■□ 3.5
RAPGEF3O95398 MIR6724-1-201ENST00000616420 92 ntBASIC36.91■■■■□ 3.5
RAPGEF3O95398 MIR6724-2-201ENST00000616483 92 ntBASIC36.91■■■■□ 3.5
RAPGEF3O95398 MIR6724-4-201ENST00000617390 92 ntBASIC36.91■■■■□ 3.5
RAPGEF3O95398 MIR6724-3-201ENST00000622482 92 ntBASIC36.91■■■■□ 3.5
RAPGEF3O95398 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC36.91■■■■□ 3.5
RAPGEF3O95398 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC36.91■■■■□ 3.5
RAPGEF3O95398 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
RAPGEF3O95398 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC36.9■■■■□ 3.5
RAPGEF3O95398 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
RAPGEF3O95398 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
RAPGEF3O95398 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC36.9■■■■□ 3.5
RAPGEF3O95398 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
RAPGEF3O95398 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC36.9■■■■□ 3.5
RAPGEF3O95398 AL512631.2-201ENST00000604634 923 ntBASIC36.89■■■■□ 3.5
RAPGEF3O95398 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC36.89■■■■□ 3.5
RAPGEF3O95398 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC36.89■■■■□ 3.5
RAPGEF3O95398 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC36.88■■■■□ 3.49
RAPGEF3O95398 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
RAPGEF3O95398 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
RAPGEF3O95398 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
RAPGEF3O95398 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
RAPGEF3O95398 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
RAPGEF3O95398 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
RAPGEF3O95398 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
RAPGEF3O95398 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC36.86■■■■□ 3.49
RAPGEF3O95398 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
RAPGEF3O95398 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC36.85■■■■□ 3.49
RAPGEF3O95398 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
RAPGEF3O95398 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC36.85■■■■□ 3.49
RAPGEF3O95398 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC36.85■■■■□ 3.49
RAPGEF3O95398 MIR4281-201ENST00000580852 62 ntBASIC36.84■■■■□ 3.49
RAPGEF3O95398 AL356740.2-201ENST00000601559 647 ntBASIC36.84■■■■□ 3.49
RAPGEF3O95398 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC36.84■■■■□ 3.49
RAPGEF3O95398 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC36.84■■■■□ 3.49
RAPGEF3O95398 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
RAPGEF3O95398 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC36.83■■■■□ 3.49
RAPGEF3O95398 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
RAPGEF3O95398 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC36.83■■■■□ 3.49
RAPGEF3O95398 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC36.82■■■■□ 3.49
RAPGEF3O95398 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC36.82■■■■□ 3.48
RAPGEF3O95398 AC104564.3-201ENST00000582367 638 ntBASIC36.82■■■■□ 3.48
RAPGEF3O95398 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
RAPGEF3O95398 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
RAPGEF3O95398 KRT18P10-201ENST00000388836 1287 ntBASIC36.8■■■■□ 3.48
RAPGEF3O95398 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC36.8■■■■□ 3.48
RAPGEF3O95398 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
RAPGEF3O95398 RASSF1-AS1-201ENST00000629828 790 ntBASIC36.8■■■■□ 3.48
RAPGEF3O95398 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC36.79■■■■□ 3.48
RAPGEF3O95398 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC36.79■■■■□ 3.48
RAPGEF3O95398 AC135279.3-201ENST00000610945 1311 ntBASIC36.79■■■■□ 3.48
RAPGEF3O95398 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC36.78■■■■□ 3.48
RAPGEF3O95398 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC36.78■■■■□ 3.48
RAPGEF3O95398 SENP5-202ENST00000419026 973 ntTSL 3 BASIC36.77■■■■□ 3.48
RAPGEF3O95398 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC36.77■■■■□ 3.48
RAPGEF3O95398 MTDHP2-201ENST00000601468 714 ntBASIC36.77■■■■□ 3.48
RAPGEF3O95398 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
RAPGEF3O95398 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
RAPGEF3O95398 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC36.76■■■■□ 3.48
RAPGEF3O95398 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC36.76■■■■□ 3.48
RAPGEF3O95398 AC106739.1-201ENST00000617035 715 ntBASIC36.76■■■■□ 3.48
RAPGEF3O95398 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC36.76■■■■□ 3.47
RAPGEF3O95398 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC36.75■■■■□ 3.47
RAPGEF3O95398 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
RAPGEF3O95398 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC36.75■■■■□ 3.47
RAPGEF3O95398 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC36.74■■■■□ 3.47
RAPGEF3O95398 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC36.74■■■■□ 3.47
RAPGEF3O95398 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC36.73■■■■□ 3.47
RAPGEF3O95398 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
RAPGEF3O95398 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC36.73■■■■□ 3.47
RAPGEF3O95398 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms