Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPIPB4C9JG80 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NPIPB4C9JG80 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPIPB4C9JG80 AC097639.1-201ENST00000565519 1891 ntBASIC21.39■■□□□ 1.01
NPIPB4C9JG80 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPIPB4C9JG80 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NPIPB4C9JG80 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NPIPB4C9JG80 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.38■■□□□ 1.01
NPIPB4C9JG80 AC093536.1-201ENST00000569153 554 ntBASIC21.38■■□□□ 1.01
NPIPB4C9JG80 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NPIPB4C9JG80 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.38■■□□□ 1.01
NPIPB4C9JG80 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPB4C9JG80 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPB4C9JG80 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPB4C9JG80 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPB4C9JG80 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPB4C9JG80 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.37■■□□□ 1.01
NPIPB4C9JG80 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.37■■□□□ 1.01
NPIPB4C9JG80 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPIPB4C9JG80 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPIPB4C9JG80 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPIPB4C9JG80 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.35■■□□□ 1.01
NPIPB4C9JG80 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
NPIPB4C9JG80 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPIPB4C9JG80 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.35■■□□□ 1.01
NPIPB4C9JG80 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPIPB4C9JG80 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPIPB4C9JG80 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPIPB4C9JG80 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.34■■□□□ 1.01
NPIPB4C9JG80 RAP2CP1-202ENST00000605179 643 ntBASIC21.34■■□□□ 1.01
NPIPB4C9JG80 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPIPB4C9JG80 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
NPIPB4C9JG80 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.34■■□□□ 1.01
NPIPB4C9JG80 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPIPB4C9JG80 AC142381.3-201ENST00000568208 1670 ntBASIC21.34■■□□□ 1.01
NPIPB4C9JG80 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPIPB4C9JG80 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.33■■□□□ 1.01
NPIPB4C9JG80 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
NPIPB4C9JG80 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
NPIPB4C9JG80 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.33■■□□□ 1
NPIPB4C9JG80 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
NPIPB4C9JG80 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.32■■□□□ 1
NPIPB4C9JG80 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPIPB4C9JG80 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NPIPB4C9JG80 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.32■■□□□ 1
NPIPB4C9JG80 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
NPIPB4C9JG80 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPB4C9JG80 RNF126P1-201ENST00000567452 1320 ntBASIC21.31■■□□□ 1
NPIPB4C9JG80 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPIPB4C9JG80 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NPIPB4C9JG80 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPB4C9JG80 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPB4C9JG80 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPIPB4C9JG80 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
NPIPB4C9JG80 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPIPB4C9JG80 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
NPIPB4C9JG80 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPIPB4C9JG80 KRT18P10-201ENST00000388836 1287 ntBASIC21.3■■□□□ 1
NPIPB4C9JG80 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.3■■□□□ 1
NPIPB4C9JG80 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPIPB4C9JG80 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPIPB4C9JG80 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPIPB4C9JG80 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.29■■□□□ 1
NPIPB4C9JG80 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.29■■□□□ 1
NPIPB4C9JG80 AC026202.3-201ENST00000600805 1127 ntBASIC21.29■■□□□ 1
NPIPB4C9JG80 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPIPB4C9JG80 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPIPB4C9JG80 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPIPB4C9JG80 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NPIPB4C9JG80 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPIPB4C9JG80 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPIPB4C9JG80 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
NPIPB4C9JG80 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPIPB4C9JG80 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPIPB4C9JG80 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.27■■□□□ 1
NPIPB4C9JG80 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPIPB4C9JG80 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPIPB4C9JG80 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.27■□□□□ 0.99
NPIPB4C9JG80 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPIPB4C9JG80 AC022211.4-201ENST00000625094 2161 ntBASIC21.26■□□□□ 0.99
NPIPB4C9JG80 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPIPB4C9JG80 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NPIPB4C9JG80 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.26■□□□□ 0.99
NPIPB4C9JG80 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPIPB4C9JG80 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
NPIPB4C9JG80 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPIPB4C9JG80 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NPIPB4C9JG80 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.26■□□□□ 0.99
NPIPB4C9JG80 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms