Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV4A0A0C4DH28 AL157400.5-201ENST00000507624 621 ntBASIC17.17■□□□□ 0.34
TRGV4A0A0C4DH28 MIR3960-201ENST00000583311 91 ntBASIC17.17■□□□□ 0.34
TRGV4A0A0C4DH28 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV4A0A0C4DH28 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV4A0A0C4DH28 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV4A0A0C4DH28 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRGV4A0A0C4DH28 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV4A0A0C4DH28 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV4A0A0C4DH28 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.16■□□□□ 0.34
TRGV4A0A0C4DH28 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV4A0A0C4DH28 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV4A0A0C4DH28 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRGV4A0A0C4DH28 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV4A0A0C4DH28 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.16■□□□□ 0.34
TRGV4A0A0C4DH28 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRGV4A0A0C4DH28 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 GPX1-201ENST00000419349 1106 ntBASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 ECEL1P2-201ENST00000461596 1295 ntBASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 AC092296.2-201ENST00000589470 999 ntBASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV4A0A0C4DH28 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRGV4A0A0C4DH28 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 ERN1-208ENST00000606895 2068 ntBASIC17.14■□□□□ 0.33
TRGV4A0A0C4DH28 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.13■□□□□ 0.33
TRGV4A0A0C4DH28 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV4A0A0C4DH28 AC010501.1-201ENST00000606270 1962 ntBASIC17.13■□□□□ 0.33
TRGV4A0A0C4DH28 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV4A0A0C4DH28 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV4A0A0C4DH28 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
TRGV4A0A0C4DH28 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV4A0A0C4DH28 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 AC025884.2-201ENST00000553429 711 ntBASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV4A0A0C4DH28 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.11■□□□□ 0.33
TRGV4A0A0C4DH28 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV4A0A0C4DH28 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV4A0A0C4DH28 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRGV4A0A0C4DH28 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV4A0A0C4DH28 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.11■□□□□ 0.33
TRGV4A0A0C4DH28 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV4A0A0C4DH28 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRGV4A0A0C4DH28 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV4A0A0C4DH28 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV4A0A0C4DH28 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV4A0A0C4DH28 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV4A0A0C4DH28 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV4A0A0C4DH28 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV4A0A0C4DH28 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRGV4A0A0C4DH28 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRGV4A0A0C4DH28 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV4A0A0C4DH28 RP9P-202ENST00000450133 1212 ntBASIC17.08■□□□□ 0.32
TRGV4A0A0C4DH28 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV4A0A0C4DH28 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV4A0A0C4DH28 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV4A0A0C4DH28 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.07■□□□□ 0.32
TRGV4A0A0C4DH28 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.07■□□□□ 0.32
TRGV4A0A0C4DH28 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.07■□□□□ 0.32
TRGV4A0A0C4DH28 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.07■□□□□ 0.32
TRGV4A0A0C4DH28 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV4A0A0C4DH28 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV4A0A0C4DH28 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.07■□□□□ 0.32
TRGV4A0A0C4DH28 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRGV4A0A0C4DH28 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV4A0A0C4DH28 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRGV4A0A0C4DH28 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV4A0A0C4DH28 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRGV4A0A0C4DH28 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV4A0A0C4DH28 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms