Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV1-2A0A0B4J238 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV1-2A0A0B4J238 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.91■□□□□ 0.94
TRAV1-2A0A0B4J238 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV1-2A0A0B4J238 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV1-2A0A0B4J238 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV1-2A0A0B4J238 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TRAV1-2A0A0B4J238 LINC00543-201ENST00000567234 1845 ntBASIC20.9■□□□□ 0.94
TRAV1-2A0A0B4J238 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV1-2A0A0B4J238 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAV1-2A0A0B4J238 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV1-2A0A0B4J238 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRAV1-2A0A0B4J238 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TRAV1-2A0A0B4J238 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TRAV1-2A0A0B4J238 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV1-2A0A0B4J238 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAV1-2A0A0B4J238 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRAV1-2A0A0B4J238 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV1-2A0A0B4J238 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV1-2A0A0B4J238 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV1-2A0A0B4J238 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV1-2A0A0B4J238 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV1-2A0A0B4J238 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV1-2A0A0B4J238 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRAV1-2A0A0B4J238 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV1-2A0A0B4J238 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAV1-2A0A0B4J238 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAV1-2A0A0B4J238 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV1-2A0A0B4J238 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV1-2A0A0B4J238 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 AC141586.4-201ENST00000624558 1573 ntBASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRAV1-2A0A0B4J238 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 AC068473.5-201ENST00000616428 2072 ntBASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV1-2A0A0B4J238 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV1-2A0A0B4J238 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAV1-2A0A0B4J238 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV1-2A0A0B4J238 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRAV1-2A0A0B4J238 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV1-2A0A0B4J238 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV1-2A0A0B4J238 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV1-2A0A0B4J238 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRAV1-2A0A0B4J238 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRAV1-2A0A0B4J238 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV1-2A0A0B4J238 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRAV1-2A0A0B4J238 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.83■□□□□ 0.93
TRAV1-2A0A0B4J238 AP006261.1-201ENST00000584783 668 ntBASIC20.83■□□□□ 0.93
TRAV1-2A0A0B4J238 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAV1-2A0A0B4J238 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.83■□□□□ 0.92
TRAV1-2A0A0B4J238 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV1-2A0A0B4J238 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV1-2A0A0B4J238 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV1-2A0A0B4J238 SLC6A10P-202ENST00000431994 2058 ntBASIC20.82■□□□□ 0.92
TRAV1-2A0A0B4J238 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV1-2A0A0B4J238 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV1-2A0A0B4J238 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV1-2A0A0B4J238 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV1-2A0A0B4J238 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAV1-2A0A0B4J238 AC087741.3-201ENST00000624270 1347 ntBASIC20.81■□□□□ 0.92
TRAV1-2A0A0B4J238 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAV1-2A0A0B4J238 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV1-2A0A0B4J238 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAV1-2A0A0B4J238 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.81■□□□□ 0.92
TRAV1-2A0A0B4J238 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV1-2A0A0B4J238 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV1-2A0A0B4J238 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.8■□□□□ 0.92
TRAV1-2A0A0B4J238 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV1-2A0A0B4J238 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRAV1-2A0A0B4J238 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV1-2A0A0B4J238 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRAV1-2A0A0B4J238 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV1-2A0A0B4J238 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV1-2A0A0B4J238 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV1-2A0A0B4J238 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV1-2A0A0B4J238 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV1-2A0A0B4J238 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRAV1-2A0A0B4J238 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV1-2A0A0B4J238 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV1-2A0A0B4J238 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV1-2A0A0B4J238 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRAV1-2A0A0B4J238 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms