Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.31■■□□□ 1
IGKV1D-43A0A0B4J1Z2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.31■■□□□ 1
IGKV1D-43A0A0B4J1Z2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.3■■□□□ 1
IGKV1D-43A0A0B4J1Z2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IGKV1D-43A0A0B4J1Z2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.3■■□□□ 1
IGKV1D-43A0A0B4J1Z2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
IGKV1D-43A0A0B4J1Z2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.29■■□□□ 1
IGKV1D-43A0A0B4J1Z2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IGKV1D-43A0A0B4J1Z2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.29■■□□□ 1
IGKV1D-43A0A0B4J1Z2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.29■■□□□ 1
IGKV1D-43A0A0B4J1Z2 RP9P-202ENST00000450133 1212 ntBASIC21.29■■□□□ 1
IGKV1D-43A0A0B4J1Z2 AC007029.1-201ENST00000604183 313 ntBASIC21.29■■□□□ 1
IGKV1D-43A0A0B4J1Z2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IGKV1D-43A0A0B4J1Z2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
IGKV1D-43A0A0B4J1Z2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.28■■□□□ 1
IGKV1D-43A0A0B4J1Z2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
IGKV1D-43A0A0B4J1Z2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.28■■□□□ 1
IGKV1D-43A0A0B4J1Z2 AC093536.1-201ENST00000569153 554 ntBASIC21.28■■□□□ 1
IGKV1D-43A0A0B4J1Z2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
IGKV1D-43A0A0B4J1Z2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
IGKV1D-43A0A0B4J1Z2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IGKV1D-43A0A0B4J1Z2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
IGKV1D-43A0A0B4J1Z2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
IGKV1D-43A0A0B4J1Z2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IGKV1D-43A0A0B4J1Z2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.27■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 AC135731.1-201ENST00000569415 2548 ntBASIC21.26■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.26■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.26■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.25■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.25■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.24■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.23■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.22■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.22■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 RAP2CP1-202ENST00000605179 643 ntBASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 RNF126P1-201ENST00000567452 1320 ntBASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGKV1D-43A0A0B4J1Z2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.2■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.2■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 AC026202.3-201ENST00000600805 1127 ntBASIC21.2■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.2■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.19■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 AC097639.1-201ENST00000565519 1891 ntBASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms