Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV16A0A0A6YYK6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV16A0A0A6YYK6 AC142381.3-201ENST00000568208 1670 ntBASIC16.59■□□□□ 0.25
TRAV16A0A0A6YYK6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV16A0A0A6YYK6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAV16A0A0A6YYK6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV16A0A0A6YYK6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV16A0A0A6YYK6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV16A0A0A6YYK6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAV16A0A0A6YYK6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV16A0A0A6YYK6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV16A0A0A6YYK6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.58■□□□□ 0.25
TRAV16A0A0A6YYK6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV16A0A0A6YYK6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV16A0A0A6YYK6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV16A0A0A6YYK6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 AC100797.4-201ENST00000631653 1827 ntBASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 AP002414.2-202ENST00000590929 1450 ntBASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L11-201ENST00000611504 1267 ntBASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L12-201ENST00000614593 1267 ntBASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L14-201ENST00000621227 1267 ntBASIC16.57■□□□□ 0.24
TRAV16A0A0A6YYK6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV16A0A0A6YYK6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV16A0A0A6YYK6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV16A0A0A6YYK6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV16A0A0A6YYK6 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV16A0A0A6YYK6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV16A0A0A6YYK6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L13-201ENST00000554103 1267 ntBASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L15-201ENST00000611059 1267 ntBASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L23-201ENST00000615195 1269 ntBASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L24-201ENST00000617576 1269 ntBASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L22-201ENST00000618238 1269 ntBASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L20-201ENST00000619712 1269 ntBASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L21-201ENST00000622058 1269 ntBASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L10-201ENST00000622460 1267 ntBASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DUX4L25-201ENST00000624915 1269 ntBASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV16A0A0A6YYK6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 MIR7108-201ENST00000614319 87 ntBASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV16A0A0A6YYK6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 AC110285.7-201ENST00000624417 1536 ntBASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV16A0A0A6YYK6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV16A0A0A6YYK6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV16A0A0A6YYK6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV16A0A0A6YYK6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV16A0A0A6YYK6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV16A0A0A6YYK6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV16A0A0A6YYK6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRAV16A0A0A6YYK6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV16A0A0A6YYK6 AC068473.5-201ENST00000616428 2072 ntBASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms