Protein–RNA interactions for Protein: A0A075B6L6

TRBV7-3, T-cell receptor beta variable 7-3 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-3A0A075B6L6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-3A0A075B6L6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-3A0A075B6L6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-3A0A075B6L6 AC010501.1-201ENST00000606270 1962 ntBASIC17.17■□□□□ 0.34
TRBV7-3A0A075B6L6 ERN1-208ENST00000606895 2068 ntBASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 ZNRF2P2-203ENST00000454624 420 ntBASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-3A0A075B6L6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-3A0A075B6L6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-3A0A075B6L6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-3A0A075B6L6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.15■□□□□ 0.34
TRBV7-3A0A075B6L6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV7-3A0A075B6L6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-3A0A075B6L6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-3A0A075B6L6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-3A0A075B6L6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.14■□□□□ 0.34
TRBV7-3A0A075B6L6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-3A0A075B6L6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-3A0A075B6L6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-3A0A075B6L6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TRBV7-3A0A075B6L6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-3A0A075B6L6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-3A0A075B6L6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-3A0A075B6L6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-3A0A075B6L6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-3A0A075B6L6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 AL359258.2-201ENST00000564063 1566 ntBASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 AC079834.2-201ENST00000609776 1949 ntBASIC17.13■□□□□ 0.33
TRBV7-3A0A075B6L6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-3A0A075B6L6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRBV7-3A0A075B6L6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV7-3A0A075B6L6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRBV7-3A0A075B6L6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV7-3A0A075B6L6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-3A0A075B6L6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-3A0A075B6L6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-3A0A075B6L6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-3A0A075B6L6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-3A0A075B6L6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 HLA-V-202ENST00000446817 847 ntBASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-3A0A075B6L6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 CLDN5-201ENST00000403084 2357 ntBASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 AC126177.7-201ENST00000547904 679 ntBASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV7-3A0A075B6L6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.08■□□□□ 0.33
TRBV7-3A0A075B6L6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-3A0A075B6L6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV7-3A0A075B6L6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-3A0A075B6L6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-3A0A075B6L6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-3A0A075B6L6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV7-3A0A075B6L6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRBV7-3A0A075B6L6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
TRBV7-3A0A075B6L6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms