Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
CDC42BPBQ9Y5S2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 TUBB8P12-201ENST00000308911 1335 ntBASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 TUBB7P-202ENST00000428444 1305 ntBASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 TUBB8P7-204ENST00000567960 1332 ntBASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 AC093724.1-201ENST00000448659 1027 ntBASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 AC022494.1-201ENST00000466044 728 ntBASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPBQ9Y5S2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 AC087289.5-201ENST00000586076 3175 ntBASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 RHBDF1P1-201ENST00000427504 1941 ntBASIC25.2■■□□□ 1.63
CDC42BPBQ9Y5S2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 KRT8P12-202ENST00000472924 1397 ntBASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 SPDYE19P-201ENST00000338590 713 ntBASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 AL512384.1-201ENST00000406683 331 ntBASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 AC114501.2-201ENST00000439631 535 ntBASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 SNX29P1-201ENST00000548357 1007 ntBASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 AC044860.1-202ENST00000559481 777 ntBASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC25.2■■□□□ 1.62
CDC42BPBQ9Y5S2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 RN7SL618P-201ENST00000477850 296 ntBASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPBQ9Y5S2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 AC112492.5-201ENST00000421897 457 ntBASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 AC093004.1-201ENST00000508850 424 ntBASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 AC055876.2-201ENST00000531834 546 ntBASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 AC007541.1-201ENST00000570282 1469 ntBASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPBQ9Y5S2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 LINC02012-201ENST00000608206 1725 ntBASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms