Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 AC067750.1-201ENST00000608826 6545 ntBASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 AC023908.3-201ENST00000564211 3047 ntBASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 AC139749.1-202ENST00000617529 3139 ntBASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 POM121L13P-201ENST00000422362 380 ntBASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 AC007322.1-201ENST00000426983 750 ntBASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 AC005104.2-201ENST00000427818 678 ntBASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 AC231657.2-201ENST00000624556 255 ntBASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 AP005117.1-202ENST00000581724 1908 ntBASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 PPT1-215ENST00000641471 2368 ntBASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 AP002490.2-201ENST00000524791 560 ntBASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 CKBP1-201ENST00000565489 1086 ntBASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 AC131212.4-201ENST00000623606 975 ntBASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 BX276092.7-203ENST00000637198 1536 ntBASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAPPC1Q9Y5R8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAPPC1Q9Y5R8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAPPC1Q9Y5R8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAPPC1Q9Y5R8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAPPC1Q9Y5R8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAPPC1Q9Y5R8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAPPC1Q9Y5R8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRAPPC1Q9Y5R8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAPPC1Q9Y5R8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAPPC1Q9Y5R8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms