Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 SPDYE21P-201ENST00000413323 827 ntBASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 AP006288.1-201ENST00000446065 395 ntBASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 AL596442.2-201ENST00000610240 980 ntBASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 PGM5P2-202ENST00000637225 1043 ntBASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FNDC3AQ9Y2H6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 AL020989.1-201ENST00000422979 469 ntBASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.38■□□□□ 0.37
FNDC3AQ9Y2H6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 KRT18P28-201ENST00000453838 1332 ntBASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 SIGLEC16-201ENST00000599858 1437 ntBASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.37■□□□□ 0.37
FNDC3AQ9Y2H6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 AL135999.2-201ENST00000622438 1686 ntBASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms