Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 AC006538.1-201ENST00000567905 1585 ntBASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC3Q9UN70 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 SERPINA7P1-201ENST00000443077 631 ntBASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 FAM185BP-201ENST00000443595 716 ntBASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGC3Q9UN70 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 HCG4-201ENST00000418983 998 ntBASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 VN2R19P-201ENST00000442399 1052 ntBASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 AC145285.3-201ENST00000564603 959 ntBASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 MIR4751-201ENST00000578027 74 ntBASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 ACTL9-202ENST00000612068 1252 ntBASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGC3Q9UN70 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGC3Q9UN70 AC079776.4-201ENST00000511039 504 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms