Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 REXO1L11P-201ENST00000620964 1927 ntBASIC16.92■□□□□ 0.3
SPASTQ9UBP0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPASTQ9UBP0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 AL135999.2-201ENST00000622438 1686 ntBASIC16.91■□□□□ 0.3
SPASTQ9UBP0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 HTR5BP-201ENST00000430851 1154 ntBASIC16.91■□□□□ 0.3
SPASTQ9UBP0 ALG1L5P-201ENST00000482043 771 ntBASIC16.91■□□□□ 0.3
SPASTQ9UBP0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 PDPK2P-202ENST00000562415 1191 ntBASIC16.91■□□□□ 0.3
SPASTQ9UBP0 OR7E47P-204ENST00000575924 449 ntBASIC16.91■□□□□ 0.3
SPASTQ9UBP0 MIR4469-201ENST00000583919 79 ntBASIC16.91■□□□□ 0.3
SPASTQ9UBP0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPASTQ9UBP0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 PMS2P2-201ENST00000425039 1128 ntBASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 RHOQP3-201ENST00000437982 621 ntBASIC16.9■□□□□ 0.3
SPASTQ9UBP0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 KRT19P2-202ENST00000557173 1012 ntBASIC16.9■□□□□ 0.3
SPASTQ9UBP0 SNHG9-202ENST00000564014 471 ntBASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AC023141.13-201ENST00000604991 943 ntBASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 PCDHA12-202ENST00000613593 2588 ntBASIC16.9■□□□□ 0.3
SPASTQ9UBP0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AC141586.5-201ENST00000624546 2050 ntBASIC16.9■□□□□ 0.3
SPASTQ9UBP0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPASTQ9UBP0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.89■□□□□ 0.3
SPASTQ9UBP0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPASTQ9UBP0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPASTQ9UBP0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms