Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 AC131009.4-201ENST00000624048 1740 ntBASIC18.83■□□□□ 0.6
BLOC1S4Q9NUP1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 VN2R19P-201ENST00000442399 1052 ntBASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 FAM185BP-201ENST00000443595 716 ntBASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 AC034105.1-201ENST00000563488 319 ntBASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 AL139011.1-202ENST00000642063 584 ntBASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 AL353732.1-201ENST00000569618 1459 ntBASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
BLOC1S4Q9NUP1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 IL9RP2-201ENST00000423948 1312 ntBASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 HCG4B-203ENST00000450128 991 ntBASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 AC079776.4-201ENST00000511039 504 ntBASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 MIR4751-201ENST00000578027 74 ntBASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 Z83851.2-201ENST00000609564 659 ntBASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BLOC1S4Q9NUP1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 AC005412.3-201ENST00000580309 715 ntBASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 AL118508.1-201ENST00000613502 2345 ntBASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 AC006538.1-201ENST00000567905 1585 ntBASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.8■□□□□ 0.6
BLOC1S4Q9NUP1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BLOC1S4Q9NUP1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms