Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.13■□□□□ 0.81
RTN4Q9NQC3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
RTN4Q9NQC3 AL137784.3-201ENST00000623858 2288 ntBASIC20.13■□□□□ 0.81
RTN4Q9NQC3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 SDHAP2-201ENST00000455183 2001 ntBASIC20.12■□□□□ 0.81
RTN4Q9NQC3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 FAM197Y1-201ENST00000421178 764 ntBASIC20.12■□□□□ 0.81
RTN4Q9NQC3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 MIR4651-201ENST00000582622 73 ntBASIC20.12■□□□□ 0.81
RTN4Q9NQC3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 AC099343.3-201ENST00000605834 2503 ntBASIC20.12■□□□□ 0.81
RTN4Q9NQC3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC20.12■□□□□ 0.81
RTN4Q9NQC3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 AC013268.4-201ENST00000637413 2228 ntBASIC20.11■□□□□ 0.81
RTN4Q9NQC3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 GOLGA8DP-202ENST00000341390 2184 ntBASIC20.11■□□□□ 0.81
RTN4Q9NQC3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTN4Q9NQC3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.1■□□□□ 0.81
RTN4Q9NQC3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms