Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 AC079776.2-201ENST00000641154 1609 ntBASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 FAM86EP-206ENST00000510506 987 ntBASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 AL353135.1-201ENST00000606729 504 ntBASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 AC114341.1-201ENST00000618070 349 ntBASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 AL121956.5-201ENST00000625261 221 ntBASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 AC103702.1-201ENST00000548801 2630 ntBASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 AC096582.2-201ENST00000510860 516 ntBASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC52A3Q9NQ40 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 GGT4P-201ENST00000623672 1708 ntBASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 KRT18P1-202ENST00000452408 1331 ntBASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 TSSC2-201ENST00000450217 709 ntBASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC52A3Q9NQ40 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms