Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 PRORSD1P-202ENST00000563365 2154 ntBASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A20Q9NP91 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 AC096734.2-201ENST00000562054 433 ntBASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 AC040169.1-201ENST00000565382 521 ntBASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 AC105020.1-201ENST00000435356 2205 ntBASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A20Q9NP91 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 SLC22A20-204ENST00000530038 1673 ntBASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 RHOQP3-201ENST00000437982 621 ntBASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A20Q9NP91 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms