Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GCM1Q9NP62 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.53□□□□□ -0.08
GCM1Q9NP62 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 PTCHD3P3-201ENST00000403073 906 ntBASIC14.53□□□□□ -0.08
GCM1Q9NP62 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GCM1Q9NP62 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 AC120114.3-201ENST00000611923 658 ntBASIC14.53□□□□□ -0.08
GCM1Q9NP62 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.53□□□□□ -0.08
GCM1Q9NP62 AL805961.1-202ENST00000641562 540 ntBASIC14.53□□□□□ -0.08
GCM1Q9NP62 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GCM1Q9NP62 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GCM1Q9NP62 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GCM1Q9NP62 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GCM1Q9NP62 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.53□□□□□ -0.08
GCM1Q9NP62 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GCM1Q9NP62 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GCM1Q9NP62 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GCM1Q9NP62 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GCM1Q9NP62 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
GCM1Q9NP62 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GCM1Q9NP62 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GCM1Q9NP62 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GCM1Q9NP62 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
GCM1Q9NP62 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GCM1Q9NP62 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GCM1Q9NP62 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 AP002414.1-201ENST00000391405 1147 ntBASIC14.52□□□□□ -0.09
GCM1Q9NP62 SLC25A1P3-201ENST00000395415 828 ntBASIC14.52□□□□□ -0.09
GCM1Q9NP62 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 RPS15P9-201ENST00000494093 319 ntBASIC14.52□□□□□ -0.09
GCM1Q9NP62 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.52□□□□□ -0.09
GCM1Q9NP62 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GCM1Q9NP62 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 EGFEM1P-202ENST00000431685 1563 ntBASIC14.51□□□□□ -0.09
GCM1Q9NP62 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms