Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
KIAA1549Q9HCM3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KIAA1549Q9HCM3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 ACTG1P14-201ENST00000446382 1122 ntBASIC15□□□□□ -0.01
KIAA1549Q9HCM3 CYMP-203ENST00000474680 1263 ntBASIC15□□□□□ -0.01
KIAA1549Q9HCM3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 AC087641.1-201ENST00000557561 1021 ntBASIC15□□□□□ -0.01
KIAA1549Q9HCM3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 AL355306.1-201ENST00000415580 579 ntBASIC15□□□□□ -0.01
KIAA1549Q9HCM3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 FAM58DP-201ENST00000428076 619 ntBASIC15□□□□□ -0.01
KIAA1549Q9HCM3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 KRT18P28-201ENST00000453838 1332 ntBASIC15□□□□□ -0.01
KIAA1549Q9HCM3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15□□□□□ -0.01
KIAA1549Q9HCM3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms