Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.65■□□□□ 0.74
VAT1LQ9HCJ6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAT1LQ9HCJ6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VAT1LQ9HCJ6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VAT1LQ9HCJ6 AC026471.1-201ENST00000564629 3026 ntBASIC19.65■□□□□ 0.74
VAT1LQ9HCJ6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.65■□□□□ 0.74
VAT1LQ9HCJ6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.65■□□□□ 0.74
VAT1LQ9HCJ6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VAT1LQ9HCJ6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
VAT1LQ9HCJ6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VAT1LQ9HCJ6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
VAT1LQ9HCJ6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
VAT1LQ9HCJ6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 DNAJB3-201ENST00000446806 729 ntBASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 PDPK2P-202ENST00000562415 1191 ntBASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VAT1LQ9HCJ6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 AL078644.1-201ENST00000609881 752 ntBASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VAT1LQ9HCJ6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 DUX4L17-201ENST00000557360 1267 ntBASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms