Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 KRT8P10-201ENST00000450021 1447 ntBASIC20.88■□□□□ 0.93
UPF2Q9HAU5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 AC145285.6-201ENST00000604632 637 ntBASIC20.88■□□□□ 0.93
UPF2Q9HAU5 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.88■□□□□ 0.93
UPF2Q9HAU5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
UPF2Q9HAU5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 FAM220CP-201ENST00000395253 831 ntBASIC20.87■□□□□ 0.93
UPF2Q9HAU5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 STK19B-204ENST00000512515 211 ntBASIC20.87■□□□□ 0.93
UPF2Q9HAU5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 AC011558.1-201ENST00000623459 338 ntBASIC20.87■□□□□ 0.93
UPF2Q9HAU5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UPF2Q9HAU5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 AC009336.1-201ENST00000608941 1553 ntBASIC20.86■□□□□ 0.93
UPF2Q9HAU5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 GUSBP12-201ENST00000513727 720 ntBASIC20.86■□□□□ 0.93
UPF2Q9HAU5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms