Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 AC079781.4-201ENST00000641908 219 ntBASIC18.65■□□□□ 0.58
TRIM6Q9C030 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 AC018695.7-201ENST00000624587 2492 ntBASIC18.65■□□□□ 0.58
TRIM6Q9C030 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM6Q9C030 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6Q9C030 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM6Q9C030 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TRIM6Q9C030 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM6Q9C030 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TRIM6Q9C030 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
TRIM6Q9C030 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 RHOQP3-201ENST00000437982 621 ntBASIC18.64■□□□□ 0.57
TRIM6Q9C030 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 AC005829.1-201ENST00000570002 483 ntBASIC18.64■□□□□ 0.57
TRIM6Q9C030 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 AC025580.3-201ENST00000617932 1424 ntBASIC18.64■□□□□ 0.57
TRIM6Q9C030 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM6Q9C030 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6Q9C030 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 RPS8P6-201ENST00000426177 609 ntBASIC18.63■□□□□ 0.57
TRIM6Q9C030 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 AC004967.1-201ENST00000453589 447 ntBASIC18.63■□□□□ 0.57
TRIM6Q9C030 SLC25A6P2-201ENST00000497974 877 ntBASIC18.63■□□□□ 0.57
TRIM6Q9C030 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 AC129492.6-201ENST00000611383 1305 ntBASIC18.63■□□□□ 0.57
TRIM6Q9C030 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.63■□□□□ 0.57
TRIM6Q9C030 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6Q9C030 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRIM6Q9C030 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRIM6Q9C030 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM6Q9C030 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TRIM6Q9C030 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM6Q9C030 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM6Q9C030 AC211486.1-202ENST00000416371 468 ntBASIC18.62■□□□□ 0.57
TRIM6Q9C030 AL513480.1-201ENST00000451731 511 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms