Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
UPF3BQ9BZI7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
UPF3BQ9BZI7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.28■□□□□ 0.84
UPF3BQ9BZI7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF3BQ9BZI7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPF3BQ9BZI7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPF3BQ9BZI7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
UPF3BQ9BZI7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPF3BQ9BZI7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 HLA-A-202ENST00000376806 1854 ntBASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 AP000347.1-202ENST00000435868 847 ntBASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 NKAPP1-205ENST00000585790 367 ntBASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF3BQ9BZI7 AC008741.2-201ENST00000612792 3115 ntBASIC20.27■□□□□ 0.83
UPF3BQ9BZI7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.27■□□□□ 0.83
UPF3BQ9BZI7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 AC092364.2-201ENST00000596710 2692 ntBASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 AL353135.1-201ENST00000606729 504 ntBASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 AL391256.1-201ENST00000443260 1855 ntBASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 AL590787.1-201ENST00000568856 1315 ntBASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF3BQ9BZI7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 AP002414.1-201ENST00000391405 1147 ntBASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
UPF3BQ9BZI7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms