Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 AC009407.1-201ENST00000568958 598 ntBASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
PCDH11XQ9BZA7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 BANF1P1-201ENST00000553684 263 ntBASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 SPTSSB-204ENST00000617024 1292 ntBASIC21.76■■□□□ 1.07
PCDH11XQ9BZA7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 AC007274.1-201ENST00000439805 662 ntBASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH11XQ9BZA7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 CU639417.3-201ENST00000624240 1404 ntBASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 RPL37AP1-201ENST00000412502 279 ntBASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 AC124947.2-201ENST00000547118 1133 ntBASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 AL589739.1-201ENST00000607720 493 ntBASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms