Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 AL139011.1-202ENST00000642063 584 ntBASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM62Q9BVG3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 AC002347.1-201ENST00000569543 541 ntBASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 AC026471.1-201ENST00000564629 3026 ntBASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM62Q9BVG3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 MIR940-201ENST00000401276 94 ntBASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 AC004877.2-201ENST00000623941 599 ntBASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 BCAR1-209ENST00000546196 1340 ntBASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM62Q9BVG3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM62Q9BVG3 AC006277.1-201ENST00000624348 1610 ntBASIC17.61■□□□□ 0.41
TRIM62Q9BVG3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRIM62Q9BVG3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.61■□□□□ 0.41
TRIM62Q9BVG3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM62Q9BVG3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM62Q9BVG3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms