Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 AC026271.2-201ENST00000428091 497 ntBASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 AC097488.1-201ENST00000507834 756 ntBASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 AP003041.3-201ENST00000527151 707 ntBASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 AF186192.3-201ENST00000583427 947 ntBASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEC22CQ9BRL7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 AL596087.1-201ENST00000400979 1969 ntBASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 FLJ16779-201ENST00000612722 7638 ntBASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 AC002558.1-201ENST00000488906 803 ntBASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 AC113404.2-201ENST00000507884 177 ntBASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 AC022532.1-201ENST00000624563 1728 ntBASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEC22CQ9BRL7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SEC22CQ9BRL7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms